Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02740 ATGGAAACGAGTCCCAGCCGTACGATTAAGCTCCTCTGCAGCTACGGCGGAAAGATCCTCCCACGTGCTACCGACGGCGGGCTCCGTTTCATCGGTGGCCACACCAGAGTCACCGTGGACCGTTCCATTTGCTTCTCATATCCATTTTTTAGCGTTGTTTCTCTCTCAATTTTAAGAGCGTTGTGCGGTTCGTCTGTGACATTACGGTGTCAATTGCCGAACGAAGACTTAGAAACCTTGATCTCCCTCACCAACAACGAAGATCTGACGCACATAAGCAAAGAATATGACCGCGCTTCGTCGAAACTACCTCATCCGTTGAATATCAGAGCCGTGCTGTTTCGGCCAGAATCGTCGAAGAAGGTTTCTCCGGCAACGTCGTCTCCGTTGAAGAAGTTGAAGATGACACTTAACATAATCGGAAATATTTAA 432 0.4861 METSPSRTIKLLCSYGGKILPRATDGGLRFIGGHTRVTVDRSICFSYPFFSVVSLSILRALCGSSVTLRCQLPNEDLETLISLTNNEDLTHISKEYDRASSKLPHPLNIRAVLFRPESSKKVSPATSSPLKKLKMTLNIIGNI 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02740 143 PANTHER OS05G0427100 PROTEIN-RELATED 5 130 - -
Aip08g02740 143 PANTHER PB1 DOMAIN PROTEIN 5 130 - -
Aip08g02740 143 SUPERFAMILY CAD & PB1 domains 25 122 - -
Aip08g02740 143 Pfam PB1 domain 29 102 IPR000270 GO:0005515
Aip08g02740 143 SMART PB1_new 23 114 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02740 Aip-Chr8 114161524 114162032 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02740 9 102 MAP Kinase Kinase Kinase AT1G04700 44.898 8.45e-18 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02740 - - aip:107611558 250.751