Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip08g02733 | ATGTGGAGAGAAGCTTTCATGAAGGCGTATAAGGCCATGGACAAAGAGCTAAGGTCTCATCCGAATCTGGATTGTTTCTGTAGTGGGAGCACGGCTGTAACCATAGTGAAGCAGGGATCAAATCTGTTCATGAGCAACATAGGGGATTCCCGAGCAATCATGGGATCCAAGGACAGCAATGACTCCATGGTGGCAATTCAGTTGACAATTGATTTGAAACCTGATTTGCCAAGGGAAGCTGAAAGAATCAAAAGGTGCAAGGGCAGGGTATTTGCCTTGCAAGATGAACCAGAAGTTCCAAGGGTGTGGTTACCTTTTGATGATGCACCTGGATTAGCAATGGCTAGAGCATTTGGCGATTTTTGTTTGAAGGATTACGGTGTCATTTCTATACCAGAATTTTCTTACCGGCTTCTTACAGACAAAGACGAGTTCATTGTTCTTGCCTCGGATGGAGTCTGGGATGTGTTAAGCAATGAAGAGGTGGTTGAGATAGTATCCACGGCACCAACTCGAGCATCAACAGCAAGGGTTCTGGTGGATTCTGCAGCCCGAGAGTGGAAACTCAAGTATCCCACGTCAAAGATGGATGATTGTGCTGTTGTATGCCTTTTTTTGGATGGTAAAATGGATGTGGAATCTGATTGTGATGAGCAATGCTATTCTTCTGCAACAATCCAAAGCAACCATTCGGGTAATCCAGTTGAGTCCGATGATGGTCAAAAGGCCGAGCCTTCTTTGCAAAGGAACTTCACTGTATGA | 762 | 0.4501 | MWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMSNIGDSRAIMGSKDSNDSMVAIQLTIDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKDYGVISIPEFSYRLLTDKDEFIVLASDGVWDVLSNEEVVEIVSTAPTRASTARVLVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDVESDCDEQCYSSATIQSNHSGNPVESDDGQKAEPSLQRNFTV | 253 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip08g02733 | 253 | MobiDBLite | consensus disorder prediction | 227 | 253 | - | - | |
| Aip08g02733 | 253 | CDD | PP2Cc | 1 | 206 | IPR001932 | - | |
| Aip08g02733 | 253 | PANTHER | - | 1 | 252 | - | - | |
| Aip08g02733 | 253 | SUPERFAMILY | PP2C-like | 2 | 208 | IPR036457 | - | |
| Aip08g02733 | 253 | SMART | PP2C_4 | 1 | 204 | IPR001932 | - | |
| Aip08g02733 | 253 | PANTHER | ALPHABET, ISOFORM E-RELATED | 1 | 252 | - | - | |
| Aip08g02733 | 253 | Pfam | Protein phosphatase 2C | 4 | 171 | IPR001932 | - | |
| Aip08g02733 | 253 | Gene3D | - | 1 | 214 | IPR036457 | - | |
| Aip08g02733 | 253 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 206 | IPR001932 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aip08g02733 | Aip-Chr8 | 114078595 | 114079939 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aip08g02733 | 1 | 253 | PP2C-type Phosphatase Gene Family | AT1G03590 | 80.315 | 5.39e-146 | 414 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip08g02733 | - | - | aip:107612736 | 513.842 |