Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02717 ATGGCTTCTTCAAATTCACCATGCGCAGCATGCAAATTTCTTCGAAGAAAATGCCAACCAGAGTGCGCTTTTGCACCATACTTCCCACCAGATCAGCCTCAGAAGTTCGCGAATGTTCATAGAATCTTTGGTGCAAGCAATGTTACGAAGCTTCTCAACGATCTACACCCTCACCAGCGCGAAGACGCCGTGAATTCCCTCGCGTACGAGGCGGAGATGCGCCTTCGCGACCCGGTCTATGGTTGCGTCGGCGTCATCTCCCTCCTCCAGCACCAGCTCCGGCAGCTCCAGGTGGATCTTTACTGCGCTAAATCGGAGCTATCTAGGTACCAAAATTTGAGTATCAACACCAACCACGCCTTCGTTGGTAGTGAATCTGGTGCCGTGGGATACCAGCATCAGCAGAACAATAATTCTGGTTCTGCTGGTGTTGGAACCCGCGACAACAATAGTTACTACCAACACCATCACCATCACCACCACCATCAGTTCTTTCCGCAACAACAGATTGTAAGAAGTTTTGATGGAGGGAGCAATTATGATGCTAGTCTCTTGGCTATGAACATCTCCGCTAGCTTAGGGCAGCTCAATCAGCTTCCGGCTGGCGGCGGTGACGACCGCCGCACCGTCAACAACCCTTCCTAG 645 0.5147 MASSNSPCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQVDLYCAKSELSRYQNLSINTNHAFVGSESGAVGYQHQQNNNSGSAGVGTRDNNSYYQHHHHHHHHQFFPQQQIVRSFDGGSNYDASLLAMNISASLGQLNQLPAGGGDDRRTVNNPS 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02717 214 MobiDBLite consensus disorder prediction 130 150 - -
Aip08g02717 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 181 - -
Aip08g02717 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-LIKE 3 181 - -
Aip08g02717 214 MobiDBLite consensus disorder prediction 130 162 - -
Aip08g02717 214 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Aip08g02717 214 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02717 Aip-Chr8 113808627 113809271 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02717 2 214 AS2 family AT1G65620 60.000 2.00e-76 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aip08g02717 LOB 3e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02717 - - gmx:100819502 333.183