Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02704 ATGTCTATATTGAAGAACAAGGTTGTGCTTCAGAACAAGAGAATTGAAATAGATGCTGCTGAGTATGATACTGTTAAGTATTGGAAACAAAGGGCCTTGCGTTTGGAGAAATTGGTTGAGGCAAGCATCCAGAGAGAGCAGATACTCCAAGACAAGTTGCTTGAAAGGATCAACAACATTGAGAGGCAATCCTCACATGTAGAAGAACTCTCCCAGATTCTCAAAAGAGCAGATAATTTCTTGCATTTCATCCTCCAGAATGCACCTGTTGTTATTGGCCATCAGGACAAGGAATTGCGATACCGGTTTATCTATAATCATTTTCCAAGTTTGCAAGAGGAGGACATAATAGGAAAAACAGATGTGGAAATATTCACAGGATCTGGGGTCAAAGAATCTCAAGAGTTCAAGAGAGAAGTCTTGGAGAAAGGATTACCTGCAAAAAGGGAAATCACTTTTGAGACAGAACTATTCGGATCAAAGACATTCTTGATATATGTAGAACCCGTGTTTAGCAAAGTAGGGGAGACAATTGGAATAAACTATATGGGAATGGATGTAACAGATCAGGTGCAGAAAAGAGAAAGGATGGCCAAGATTCGGGAAGAGATTGCAGTTCAGAAAGCAAAGGAAACAGAACTAAACAAAACCATTCACATTACAGAGGAGACTATGAGAGCAAAACAAATGCTGGCCACAATGTCTCATGAGATAAGGTCTCCATTATCTGGCCACAATATCATGATGTATTTACTATCAACATCTCAACACTATGTTAACACACATAAATAA 792 0.3889 MSILKNKVVLQNKRIEIDAAEYDTVKYWKQRALRLEKLVEASIQREQILQDKLLERINNIERQSSHVEELSQILKRADNFLHFILQNAPVVIGHQDKELRYRFIYNHFPSLQEEDIIGKTDVEIFTGSGVKESQEFKREVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKVGETIGINYMGMDVTDQVQKRERMAKIREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGHNIMMYLLSTSQHYVNTHK 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02704 263 Coils Coil 43 63 - -
Aip08g02704 263 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 5 255 - -
Aip08g02704 263 CDD HisKA 228 251 IPR003661 GO:0000155|GO:0007165
Aip08g02704 263 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 5 255 - -
Aip08g02704 263 Gene3D - 191 262 - -
Aip08g02704 263 SUPERFAMILY PYP-like sensor domain (PAS domain) 70 188 IPR035965 -
Aip08g02704 263 Gene3D PAS domain 58 190 - -
Aip08g02704 263 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 223 254 IPR036097 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02704 Aip-Chr8 113301016 113302189 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02704 5 256 Histidine Kinase Gene Family AT5G10720 69.841 5.52e-119 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02704 - - aip:107611583 499.975