Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02700 ATGGGTTCTTCAGTTGGAGGAGGCAACAGCAACAACGCAGGCGTGGAGTGGCACGTGCGCCCTTCCAACCCTAAGAACCCCATCGTTTTTTTCGATGTCACCATCGGTAACATACCTGCTGGCAGGATCAAGATGGAGCTTTTCGCTGATATTACCCCCAAAACCGCTGAGAATTTCAGGCAGTTCTGCACTGGGGAGTACAGGAAAGCAGGACTACCTGTCGGCTACAAGGGTAGTCAATTTCATAGAGTTATTAAGGATTTTATGATTCAGGCTGGTGATTTCGTTAAGGGTGATGGCAGTGGATGTGTCTCTATCTATGGACACAAGTTTGATGATGAAAATTTTATTGCCAAGCATACTGGCCCTGGTCTTCTTTCAATGGCAAACAGTGGAGTTAACACCAATGGTTGTCAGTTCTTCATAACTTGTTCAAAATGTGACTGGCTTGACAACAAGCATGTGGTTTTTGGGAGAGTGCTTGGAGATGGTCTTTTGGTTGTCCGGAAGATCGAGAATGTCGCAACTGGACCCAATAACCGGCCGAAATTAGCTTGTGTCATTGCTGAATGTGGTGAAATGTAA 585 0.4581 MGSSVGGGNSNNAGVEWHVRPSNPKNPIVFFDVTIGNIPAGRIKMELFADITPKTAENFRQFCTGEYRKAGLPVGYKGSQFHRVIKDFMIQAGDFVKGDGSGCVSIYGHKFDDENFIAKHTGPGLLSMANSGVNTNGCQFFITCSKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEM 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02700 194 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 47 62 IPR002130 GO:0000413|GO:0003755
Aip08g02700 194 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 81 93 IPR002130 GO:0000413|GO:0003755
Aip08g02700 194 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 124 139 IPR002130 GO:0000413|GO:0003755
Aip08g02700 194 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 139 151 IPR002130 GO:0000413|GO:0003755
Aip08g02700 194 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 152 167 IPR002130 GO:0000413|GO:0003755
Aip08g02700 194 Gene3D - 16 194 IPR029000 -
Aip08g02700 194 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 20 194 - -
Aip08g02700 194 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 31 192 IPR002130 GO:0000413|GO:0003755
Aip08g02700 194 SUPERFAMILY Cyclophilin-like 17 194 IPR029000 -
Aip08g02700 194 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE H 20 194 - -
Aip08g02700 194 CDD cyclophilin_ABH_like 27 192 - -
Aip08g02700 194 PIRSF Peptidylpro_ismrse 15 194 IPR024936 GO:0003755
Aip08g02700 194 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 76 93 IPR020892 GO:0003755|GO:0006457
Aip08g02700 194 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 30 193 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02700 Aip-Chr8 113157275 113163710 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02700 23 191 U-box Gene Family AT5G67530 41.520 7.05e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02700 K09567 - gmx:100813835 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g02700 08 113157275 113163710 Aip08g02700 08 113157275 113163710 ECH