Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02686 ATGGATGAAAAGCGCCGAACCGTCGCGTCCCTTGTATCGAAGCTAAGCTCCGTATCCGAACGAACCCGAATCGACGCGCTCATCGAGCTCCGTCAGATGTCGAAGCTCGACCCGGAAACCCGCCCCATAATTGCCGAAGCTGGCGCCATCCCTTTCCTCGCTGAAACACTCTACTCTTCCTCTCATCCTTCCCAAGAAAACGCCGCCGCCACGCTCTTAAACCTTTCCATCTCCGCAAAGGAACCGTTGGTTTCCACGCGCGGTGTCCTCGACGCCATAGCGCACGTGATCTCCCACCACAGCTCCTCCTCCTCCGCCTCCGCCGTCCAATCCGCCGCAGCCACAATCCACAGCCTCCTCGCCGCCACCGACGACTACCGCCCCTCTGTCGGCGCCAAGCGCGACATCGTCTACGCGCTTGTGGACGTCCTCCGGTGCCACGTGTCGTCCCCTCCGAGAACCATCAAAGACGCGCTGAAGGCGCTGTTCGGCATTGCGCTGTACCCTCCGAACCGCGCCACGATGGTGCATCTTGGAGTGATCCCCGCGCTTTTCGCCCTTGTGGTGAAGGACGGGCGCGTGGGGATCGTCGAGGACACCACCGCGGTGATCGCGCAAGTAGCCGGGTGCGAGGAGAGCGGTGAGGCCTTCCGGAAGGTCGCCGGGGTTGGGGTTCTCGCTGATCTCCTCGACCTGTCTACCGGCGCCAGTATGCGAAGCAAGGAGAATGCCGTCTCGGCGTTGCTGAATTTGGCGCGGTGCGGTGGCGAGAGCGTTGTGGCAGAGGTCAGGGAGGCGCTTACGGATATTGCGGCCAATGGGATCGATGATGTCGAGGATAATGGAAGCGCCAAGGGGAAGAACAAAGCAAAGTTGTTGAAGGTTTTGTTTGGTGATGATGATGTTAACGATGATAACAGTAGCAACAGCGTTTTGAGTTCGGGTGGAGGTTCGCAGTTTGATTCATTCTAG 972 0.5957 MDEKRRTVASLVSKLSSVSERTRIDALIELRQMSKLDPETRPIIAEAGAIPFLAETLYSSSHPSQENAAATLLNLSISAKEPLVSTRGVLDAIAHVISHHSSSSSASAVQSAAATIHSLLAATDDYRPSVGAKRDIVYALVDVLRCHVSSPPRTIKDALKALFGIALYPPNRATMVHLGVIPALFALVVKDGRVGIVEDTTAVIAQVAGCEESGEAFRKVAGVGVLADLLDLSTGASMRSKENAVSALLNLARCGGESVVAEVREALTDIAANGIDDVEDNGSAKGKNKAKLLKVLFGDDDVNDDNSSNSVLSSGGGSQFDSF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02686 323 Gene3D - 1 278 IPR011989 -
Aip08g02686 323 SUPERFAMILY ARM repeat 7 271 IPR016024 -
Aip08g02686 323 Pfam Armadillo/beta-catenin-like repeat 37 76 IPR000225 GO:0005515
Aip08g02686 323 PANTHER U BOX DOMAIN-CONTAINING 2 306 - -
Aip08g02686 323 SMART arm_5 168 209 IPR000225 GO:0005515
Aip08g02686 323 SMART arm_5 37 77 IPR000225 GO:0005515
Aip08g02686 323 SMART arm_5 210 253 IPR000225 GO:0005515
Aip08g02686 323 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 2 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02686 Aip-Chr8 112925276 112926989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02686 1 297 U-box Gene Family AT2G23140 31.438 1.11e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02686 - - mtr:MTR_8g039560 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g02686 08 112925276 112926989 Aip08g02686 08 112925276 112926989 ECH