Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02653 ATGTCTACAGATTCTGAAAACTCTGATATAGATGTAACAGGTCCAAAGGAGAGACTAATGAATCTGATGAATCGATCTGAAAACAAGTTTTGTGCTGATTGTGGAACTCCAGATCCGAAATGGGCATCTACAAGTCTTGGAGTATTTATTTGCATCAAGTGTTCTGGCGTTCATCGAAGCTTAGGAGTCCACATAACAAAGGTTCTATCGTTGAAGCTCGATGATTGGACAGATGAAGAAGTTGATACATTGCTCAATTTTGGTGGAAACACAACACTAAACAAGAAGTATGAAGCTTGCCTCCCACCTAACATTAAAAAACCGGACCCAAATTCATCAATTGAGGAACGCTCTGATTTTATAAGGCGAAAGTATGAGTTGTTGCAATTTACGGGTGGTGACAACAAATCACAACCTTGTCAAGCAAGTAATTCATCACCGGTTCAAAGTGATTCTCCTTCATTCAGTGATTCTCCGATGGACAAGAAGCAACACGAAAAACATAAACATCGAATTGGGAATGCATTGCGACATAATTGGGGAAAGAAAGATCACGAGAATAAAACTCCAAAGAAAACCAACTCATCATTGGCAGGTATGGTTGAATTTGTTGGATTAATTAAGGTTAATGTGGTAAAAGGCACTAACTTGGTTGTTCGAGATGTAGTGTCTAGTGACCCTTATGTTGTCCTTTCTTTGGGTGACCAATCAGTAAAAACACGTGTCATAAAGAAGAGTTTGAATCCAGTGTGGAATGAAAGCCTAATGTTGTCAATTCCAGAAAATATTCCTCCCCTTAAAGTGTGTGTATATGATAAGGACAAATTTTCAAACGATGATTTTATGGGTGAGGCTGAAATAGACATTGAACCTCTAGTGATAGCTACAAAAGAATATGAGGAGTCTAAAAGCTATGAGCATATGCAACAACATGGGGGATGTGGTTCAACCACAGAAAACACTTCCATTTGTGAAGATGATGCTAATGCCAATCACAAAGGAGAGATGAAACAACATTTCTCAATTAGGTTACAAAATGTTGAGAGTGGTGTGTTAGAGATTGAGATTGAATGTGTTCCTCTTACTCAATAA 1092 0.381 MSTDSENSDIDVTGPKERLMNLMNRSENKFCADCGTPDPKWASTSLGVFICIKCSGVHRSLGVHITKVLSLKLDDWTDEEVDTLLNFGGNTTLNKKYEACLPPNIKKPDPNSSIEERSDFIRRKYELLQFTGGDNKSQPCQASNSSPVQSDSPSFSDSPMDKKQHEKHKHRIGNALRHNWGKKDHENKTPKKTNSSLAGMVEFVGLIKVNVVKGTNLVVRDVVSSDPYVVLSLGDQSVKTRVIKKSLNPVWNESLMLSIPENIPPLKVCVYDKDKFSNDDFMGEAEIDIEPLVIATKEYEESKSYEHMQQHGGCGSTTENTSICEDDANANHKGEMKQHFSIRLQNVESGVLEIEIECVPLTQ 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02653 363 Gene3D Arf GTPase activating protein 2 138 IPR038508 -
Aip08g02653 363 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 202 298 IPR035892 -
Aip08g02653 363 MobiDBLite consensus disorder prediction 177 191 - -
Aip08g02653 363 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 138 IPR001164 GO:0005096
Aip08g02653 363 SMART C2_3c 206 301 IPR000008 -
Aip08g02653 363 Pfam Putative GTPase activating protein for Arf 17 131 IPR001164 GO:0005096
Aip08g02653 363 Gene3D C2 domain 203 360 IPR035892 -
Aip08g02653 363 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 5 363 IPR044518 GO:0005096|GO:0005543
Aip08g02653 363 SMART arf_gap_3 17 138 IPR001164 GO:0005096
Aip08g02653 363 SUPERFAMILY ArfGap/RecO-like zinc finger 16 131 IPR037278 -
Aip08g02653 363 ProSiteProfiles C2 domain profile. 188 303 IPR000008 -
Aip08g02653 363 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Aip08g02653 363 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Aip08g02653 363 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Aip08g02653 363 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD11-RELATED 5 363 - -
Aip08g02653 363 Pfam C2 domain 206 295 IPR000008 -
Aip08g02653 363 MobiDBLite consensus disorder prediction 132 194 - -
Aip08g02653 363 MobiDBLite consensus disorder prediction 132 157 - -
Aip08g02653 363 CDD ArfGap 19 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02653 Aip-Chr8 112228270 112246250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02653 16 363 C2H2 Transcription Factor Family AT4G21160 45.402 4.98e-105 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02653 K12486 - gmx:100789552 455.677