Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02646 ATGTTAAAAGGGACTTACGAGCTAACAGGTCTAGCTAAAGGTGTTGCTGTTGGAATATCTATAGCTGGAACAAGTGGGGTTCTGCCATTATTAATTTGTGCTTGTGTTAGATATTTCCAGAAGGAAAAAGAAAAAATTAAATTTCCAACAGAAGATTTTATATCAAGTTCAACCCAAGATGCATCTAGTAGTGGTGAATATGCTGCTAGTGCTTCTGGCCTTCCAGCCATTATGGCGGCAAAATTGATGGAATTCTTTTATCAAGAACTAGCCAAGGCTACAAATAACTTCAGCTCTGATAACAAAATTGGTCAGGGTAGATTTGGAGCTGTCTATTTTGCAAAATTGAGATGCCAAAAAGCAGCAATTAAGAATATGGATGTTCAAGCATCAACAGAGTTTCTTTCAGAGTTGATGGTCTTAAAACATGATCATCACTTGAATTTGGTGACAATGTTGACTTTTGTGAAAAGCGGATCAGAATGCTTCAATCAGCTAAAGGTTTTTACGGCCGCAGCACCTATAATACTTCTGGCAATCAAATCAGAAGAAAACAAGCTACAAGAAGTCATGGTTGGATTAGCAGCAAATGTTTTCACATTCATGTCCTCTCAGGAATCAAGCTATGTATTTCAAGAAGCTAAAATCACTGAAGTTGAACTGGCAAGTATACTAGTACATATTCTCAAGAAGCACAAGTATCCGGCAACAAAGGTGCTGAGGATAAGGAGGTTTGCCATAAAGTTTGAGATTTGGATGATGAAAGACAAAGTAAAAAACATATATACCTTCAAGCATATGGGAATGGAGAAGGTGCTGGAAGGTGTATTAGAAACCACATCAGAGCTTGAAAGCTTCAATGTTTTCTCTAGTACTGTTGGATTTAACAGGCACAATCTAACAATTCACTCACTGGTTGAGACAGCCTTCAAGTTGCTGGAAAACAGgaatcctacacggagagactag 969 0.3695 MLKGTYELTGLAKGVAVGISIAGTSGVLPLLICACVRYFQKEKEKIKFPTEDFISSSTQDASSSGEYAASASGLPAIMAAKLMEFFYQELAKATNNFSSDNKIGQGRFGAVYFAKLRCQKAAIKNMDVQASTEFLSELMVLKHDHHLNLVTMLTFVKSGSECFNQLKVFTAAAPIILLAIKSEENKLQEVMVGLAANVFTFMSSQESSYVFQEAKITEVELASILVHILKKHKYPATKVLRIRRFAIKFEIWMMKDKVKNIYTFKHMGMEKVLEGVLETTSELESFNVFSSTVGFNRHNLTIHSLVETAFKLLENRNPTRRD 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02646 322 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 155 315 - -
Aip08g02646 322 ProSitePatterns Protein kinases ATP-binding region signature. 103 124 IPR017441 GO:0005524
Aip08g02646 322 Gene3D Phosphorylase Kinase; domain 1 77 164 - -
Aip08g02646 322 PANTHER ARMADILLO-TYPE FOLD PROTEIN-RELATED 155 315 - -
Aip08g02646 322 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Aip08g02646 322 Pfam Protein tyrosine and serine/threonine kinase 100 160 IPR001245 GO:0004672|GO:0006468
Aip08g02646 322 ProSiteProfiles Protein kinase domain profile. 97 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g02646 322 SUPERFAMILY Protein kinase-like (PK-like) 78 161 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02646 Aip-Chr8 112051257 112054602 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02646 10 160 Receptor kinase-like Gene Family AT3G21630 42.038 1.09e-25 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Aip08g02646 PK_Tyr_Ser-Thr 2.7e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02646 - - ahf:112770378 308.145