Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02634 ATGAAAATCCCATCAATGCCATCATCACCCTCCTTCTCCTTTGTTCTCTTCCTTTTATTCCTCATTGTACCATTACTACAAGCCCAACAACAATCTCCATCAAAAAACGCCCCTCCTCCTCCTCCTCCTCCTCCTCCTACTTCATTGCCTCCGCCTGCTTCGGCTCAAAAACATTTTCCTCCTCCACCTCCACCTTCTTCTTCGACTCGAAAAGATGCTCCACCTCCTCCTCCTCCTTCACTGCCTCCACCTGCTTCGGCTCTAAAATATTTCCCTCCTCCACCTCCAACTTCTTCTCCACCTCCTCCTTATTTTCCTCGAAAATATGCTCCTCCTCCTCCACCTTCCCCTTCCTCTCATCCCTCGCCTTCTCCAGCTCCAATGCTTACCCCTCCTTCTCCGCCTTCAAAACACTCCCCTCCTCCGTCTCCACTACCACCTTCTACCTCTTCAGCTCCTCCCTCTCCTTCTCCAGTTTCTCCTCCTCCTTCTCCTTCCTCCAAAGAAGCCTGCCAGTCTACACTGTACCCAAAACTCTGCCGCTCCATTCTAAAATCCATTCGCTCGTCACCATCCGATCCATACAACTTAGGGAAATTCTCCATCAAACAAAGCCTCAAAAAAGTCAAGAAGCTCGCAAAAGCGTTCGATGACTTCCTCCACCACAAGTCGTCTTCTTACCTCAACCAAGCCGAGATCTCGGCTCTCGACGACTGCCGCGACCTCAACCAACTCAACGTAGACTACCTCCAAACCGTCTCCGACAACCTCAAATCTGCGACCTCATTAGACAGCAATAGAAATGAGGAATTGGTAGAGGACATCGAAACGTATCTCAGTGCGGTGGCTACTAACCACTACACTTGCTATGATGGGTTGGTGGCGGCGAAGAGTAACATCGCAGACGCGCTCGCGGTGCCTCTGAACGATGTGAAGCAACTGTATAGTGTGTCGCTTGGGTTGGTTACGGAGGCTCTGAACAAGAATAGGAAGAAGCATAAGACAAGAAAGCATGGTCTCCCTACTAATGACTACAAAGTTAGACAGCCTCTGAAGAAGCTCATTAAGTTTCTTCACACAACAACTAATAATAGTTGCAAAGAATCATCATTCAATTGTACAAGGAAAAGCGAAAGGATTCTTGAGGAAAGCAATAACAACAGCAAAGGAATTCTACTGAACAGCTATGTGATTGTGAGCATTGATGGGACAGGGAACTTCACTTCCATTGGAGACGCCATTGCTTTTGCTCCGAACAATTCAAGATCAGAAGATGGCTATTTCCTTATCTATGTCACAGAAGGGTGCTACGAGGAATATGTCACTATCCCCAAACAAAAGACTAACATTTTGCTTGTTGGAGATGGTATCAATAAGACTGTCATCACAGGGAATCATAGTGTCATAGATGGTTGGACAACTTTCAATTCTTCAACTTTTGCTGTTTCTGGAGATAGATTCATGGCAGTAGATATTACATTCAGAAACACAGCTGGCCCTGAGAAGCACCAAGCAGTAGCACTTAGAAGCAACGCTGATCTCTCCACATTCTACCGATGCAGTTTTGAAGGATATCAAGACACACTCTACGTTCACTCTCTCAGACAATTTTACAGAGAATGTGACATCTATGGAACGGTAGACTTCATCTTTGGTAACGCAGCCGTAGTTTTCCAGAGCTGCAACATCTACGCAAGAAAGCCAATGACTAACCAGAAAAACTCCGTCACGGCGCAAGGCCGGACGGATCCAAACCAAAACACCGGAATCTCAATCCAAAATTGCACCATCCAGGCCGCCCCTGACTTGGCGGCCGACGTGGAATCCACGCCGAATTACTTAGGTAGGCCGTGGAAAGAGTACTCGAGGACGGTTTATATGCAGTCATATATTGGTGACTTGATTAGCCCTTCTGGATGGTTAGAGTGGAATGGGACCGTTGGGTTAGACACACTCTTCTATGGTGAATTTAATAACTATGGTCCTGGTGCTGGTACAAGTAACAGAGTAAAATGGAAGGGTTACAACTTGTTGAATGCTACTCAAGCTTGGAATTTCACTGTTCTTAATTTTACCTTGGGAGATACATGGCTTCCTTACACTGATATACCATACACTGCAGGCCTAGAAGATTAA 2136 0.463 MKIPSMPSSPSFSFVLFLLFLIVPLLQAQQQSPSKNAPPPPPPPPPTSLPPPASAQKHFPPPPPPSSSTRKDAPPPPPPSLPPPASALKYFPPPPPTSSPPPPYFPRKYAPPPPPSPSSHPSPSPAPMLTPPSPPSKHSPPPSPLPPSTSSAPPSPSPVSPPPSPSSKEACQSTLYPKLCRSILKSIRSSPSDPYNLGKFSIKQSLKKVKKLAKAFDDFLHHKSSSYLNQAEISALDDCRDLNQLNVDYLQTVSDNLKSATSLDSNRNEELVEDIETYLSAVATNHYTCYDGLVAAKSNIADALAVPLNDVKQLYSVSLGLVTEALNKNRKKHKTRKHGLPTNDYKVRQPLKKLIKFLHTTTNNSCKESSFNCTRKSERILEESNNNSKGILLNSYVIVSIDGTGNFTSIGDAIAFAPNNSRSEDGYFLIYVTEGCYEEYVTIPKQKTNILLVGDGINKTVITGNHSVIDGWTTFNSSTFAVSGDRFMAVDITFRNTAGPEKHQAVALRSNADLSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQSCNIYARKPMTNQKNSVTAQGRTDPNQNTGISIQNCTIQAAPDLAADVESTPNYLGRPWKEYSRTVYMQSYIGDLISPSGWLEWNGTVGLDTLFYGEFNNYGPGAGTSNRVKWKGYNLLNATQAWNFTVLNFTLGDTWLPYTDIPYTAGLED 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02634 711 CDD PMEI-like_3 170 324 - -
Aip08g02634 711 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 169 323 IPR035513 -
Aip08g02634 711 PANTHER PECTINESTERASE 160 709 - -
Aip08g02634 711 SMART PMEI_2 162 321 IPR006501 GO:0004857
Aip08g02634 711 MobiDBLite consensus disorder prediction 28 172 - -
Aip08g02634 711 ProSitePatterns Pectinesterase signature 2. 543 552 IPR033131 -
Aip08g02634 711 Gene3D - 394 711 IPR012334 -
Aip08g02634 711 PANTHER PECTINESTERASE 160 709 - -
Aip08g02634 711 Gene3D Invertase/pectin methylesterase inhibitor family protein 168 325 IPR035513 -
Aip08g02634 711 MobiDBLite consensus disorder prediction 34 165 - -
Aip08g02634 711 Pfam Plant invertase/pectin methylesterase inhibitor 168 320 IPR006501 GO:0004857
Aip08g02634 711 Pfam Pectinesterase 397 694 IPR000070 GO:0030599|GO:0042545
Aip08g02634 711 SUPERFAMILY Pectin lyase-like 394 708 IPR011050 -
Aip08g02634 711 TIGRFAM PME_inhib: pectinesterase inhibitor domain 160 323 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02634 Aip-Chr8 111598620 111602901 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02634 124 709 Carbohydrate Esterase AT3G10720 57.355 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02634 K01051 - gmx:100808277 837.025