Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02633 ATGGTAGCCAATCTTGGGGTCGTCACTGGAAAGCACTTAGCAGAGCATTGTAGAAATGAATATCCTTGGGCTACCAACTTTATTCTTTGGTTTATTGCTGAAATTGCCATAGTCGCCTGTGACATTCCTGGAGCCTTTGCATTGAACATGCTTTTCAGCATACCTGTTTGGATTGGTGTTCTTCTGACAGGACTCAGTACATTGATCCTCTTAGCTTTGCAGCAATATGGGGTTAGAAAACTTGAATTCTTGATTGCATTTCTAGTATTTACAATTGCTGCATGCTTTTTTGCTGAGCTTGGATATGCAAAACTTGTTGCTAAAGAAGTTTTGAAGGCTGCAAGTGTTTGGGGTCTAGTAGCATTATGGCTAGCAGATGAGGAGTTCTTACCTTTTGATTATCAATCCTATGCTAAGGAGCTCCAGCTTAATGTAAAGAACTTGGAAGATGAGATTTCAAATAAAGACATGAATTTGTCTCCTATATTGAAGTCAATCAAGGAGCTTGAGAAAGCAGCAATCAAGATAAATGACCAGAGAAAGGAAATAGAAGCAAGTAAAGGTTGGAGAACATGGAAAGAGTACCAAATGAAAGTGAGAGATGTGAATGATAGACTTATGATGGTTGAACGTGCATTCACTGGCAGAGATGGCCTCTTAGGAATGACATGGCATAAGCATTTGGGTTCTAACTTCTAA 699 0.3934 MVANLGVVTGKHLAEHCRNEYPWATNFILWFIAEIAIVACDIPGAFALNMLFSIPVWIGVLLTGLSTLILLALQQYGVRKLEFLIAFLVFTIAACFFAELGYAKLVAKEVLKAASVWGLVALWLADEEFLPFDYQSYAKELQLNVKNLEDEISNKDMNLSPILKSIKELEKAAIKINDQRKEIEASKGWRTWKEYQMKVRDVNDRLMMVERAFTGRDGLLGMTWHKHLGSNF 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02633 232 Pfam Transferrin receptor-like dimerisation domain 158 228 IPR007365 -
Aip08g02633 232 Pfam Natural resistance-associated macrophage protein 1 114 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip08g02633 232 PANTHER METAL TRANSPORTER NRAMP6 2 114 - -
Aip08g02633 232 Coils Coil 166 186 - -
Aip08g02633 232 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 2 114 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip08g02633 232 Coils Coil 138 158 - -
Aip08g02633 232 PRINTS Natural resistance-associated macrophage protein signature 78 99 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip08g02633 232 PRINTS Natural resistance-associated macrophage protein signature 53 72 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip08g02633 232 SUPERFAMILY Transferrin receptor-like dimerisation domain 131 228 IPR036757 -
Aip08g02633 232 Gene3D - 132 231 IPR036757 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02633 Aip-Chr8 111578311 111580086 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02633 1 111 Inorganic Solute Cotransporters AT1G15960 78.261 3.53e-54 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02633 K21398 - aip:107608842 404.831