Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02582 ATGACTACTGACCATGAATCTAATACTGAGCGGGGCAGCATTGAGAACAGAGGTGGCTTTGTCTCAAACATGCCAGGGCAGTGTTTCTTAGAGAATATTTCTACTTCTACCCTCCTAGCCAGAACAACAATCTCTGCTGTCTATCAAACTGCAAAATTAATCAGTTCTGTCCCTAATGTGTCATATCAGAAGAAGCTTTTCCTGATGCCTTGTTCCATCAATTGCTTGTGGCCATGGCTCATCCGGACCGTGAAAGACAAATTGGAGCACATAGTGTCTTCTCTATGGTGCTTATGCCATCAATGGTTTCTCCTTGAGCCTGATTCAATATCTCAAATCAAGAAACAAGAGCTCATGGTGGAGAAAATGAACCGAGACATTCGTGAAATCACTGATAAAATCAAAGAGAAAATTTCAGAAAAGGATTATGTTGCGTATGGGATGAGAAGCTCATACTACTGGAAAATGGAATGGAGACGCCGCGTCGCGCGAAAAGGGAAGATACTAAGTAACTTGTATGTGGTTCTTGATGAATTGTGTTTCATGAACAATGCACCTAGGAGAAGATCTAAGAAGGAGAAATGCTTCACGGAAGAAGAGATTGATAACCATGAAAATTGTAGTGCAGTTCAATGCTGA 639 0.4131 MTTDHESNTERGSIENRGGFVSNMPGQCFLENISTSTLLARTTISAVYQTAKLISSVPNVSYQKKLFLMPCSINCLWPWLIRTVKDKLEHIVSSLWCLCHQWFLLEPDSISQIKKQELMVEKMNRDIREITDKIKEKISEKDYVAYGMRSSYYWKMEWRRRVARKGKILSNLYVVLDELCFMNNAPRRRSKKEKCFTEEEIDNHENCSAVQC 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02582 212 Coils Coil 113 140 - -
Aip08g02582 212 PANTHER PUMP INTERACTOR, PUTATIVE-RELATED 105 201 - -
Aip08g02582 212 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 105 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02582 Aip-Chr8 109391171 109392877 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02582 1 28 PP2C-type Phosphatase Gene Family AT1G22280 71.429 1.18e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02582 K21842 - adu:107462202 189.119