Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02572 ATGGTATTGATTCCTTTGTTTGATGATTATGGAAATCGTTTTATGATGCTTCAACTACCTATTGAAGAAGACACACAAGAACTAACGGAATTACCTTTTAACGACATTTGGCGCACTTTGAGGCCGTTGCCGCCAGTTAAGAGCTACATCGAGAAGAAAGATAAGGAGGAGGACACCAACCGATCGGCCGGTCAGAAAGTTAATTATTGTTCTGTTTGTATAGAAGAGTTCAAGAACGGAGAGTTGATTCAACCTTTTGGAGTTTGTGTTCATGAGTTCCATTCAACTTGTATAAACTCTTGGTTGCAACGTGGAAAAACTAATTGTCCAATTTGTCGTGCTGATTTAGAATTTTAG 357 0.3866 MVLIPLFDDYGNRFMMLQLPIEEDTQELTELPFNDIWRTLRPLPPVKSYIEKKDKEEDTNRSAGQKVNYCSVCIEEFKNGELIQPFGVCVHEFHSTCINSWLQRGKTNCPICRADLEF 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02572 118 PANTHER OS06G0666500 PROTEIN 40 116 - -
Aip08g02572 118 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 40 116 - -
Aip08g02572 118 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 39 117 IPR013083 -
Aip08g02572 118 SUPERFAMILY RING/U-box 52 116 - -
Aip08g02572 118 ProSiteProfiles Zinc finger RING-type profile. 70 113 IPR001841 -
Aip08g02572 118 Pfam Ring finger domain 69 113 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02572 Aip-Chr8 109137854 109138210 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02572 70 114 C3H Transcription Factor Family AT4G00305 42.222 4.03e-10 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02572 - K16282 adu:107470824 133.65