LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip08g02571	ATGTTGGAACTACCATTACTCAAAATGTCATTTCGTTTTACCAAATTCGATTTGAGGCATCTTCGTTACTTTGCTGAGAACCTGCACCCGGAGCTGCTAGGTGGTGCGGTTGCTCTTGTCGCCGTTGGTCTCACCGCTGCTTATTTTTATCATCGGTTAACCAAAGTTCCCAAAAAATGCCTGGACCCCAACAACTTCAAAGAATTTGAACTTATAAAGAAGACCCAACTCAGCCACAACGCAGCAAGATTCAAATTCGCCCTTCCAACTCCTACATCGGTGTTGGGCCTTCCAGTCGGAAAAAATATTCTTGCCAGGGGAAGCGATAGCAGCGGAGCGGAGGTTATGAAATCATACACTCCAGTCACGTTGGATTCGGATGTTGGCTACTTTGAATTAGTTGTTAAGATGTACCCAAATGGAAAGATGTCGCACCATTTTAGAGAAATGAAAGTTGGAGACAAGTTGGCTGTGAAGGGCCCCAAGGGGCGATTCAGTTACAAGCCTGGTCAAGTTCGGGCATTTGGAATGATTGCTGGAGGTACAGGCATCACCCCAATGTTTCAGATCACAAGGGCCATTCTAGAAAACCCCAAGGATAAAACAAAGATTTCCCTTTTATATGCCAATGTGACGGTGGACGATATTCTGTTAAAGGAAGAACTAGATAATTTTGCCAGCAAATATCCAAGTCAATTCAAAGTCTATTATGTTCTTAATAAGCCCCCTAATGAGTGGAACGGTGGCGTTGGGTACATAACTAAGGATATGATTCAAACCCATTGTCCTGCACCAGCAAGAGATATCCAGATACTGATGTGCGGTCCACAACCCATGAATAACACAATGACAAGTTATCTTAATGAACTTGGCTACACATCAAAGATGCAATTCGTGTTCTAG	903	0.4341	MLELPLLKMSFRFTKFDLRHLRYFAENLHPELLGGAVALVAVGLTAAYFYHRLTKVPKKCLDPNNFKEFELIKKTQLSHNAARFKFALPTPTSVLGLPVGKNILARGSDSSGAEVMKSYTPVTLDSDVGYFELVVKMYPNGKMSHHFREMKVGDKLAVKGPKGRFSYKPGQVRAFGMIAGGTGITPMFQITRAILENPKDKTKISLLYANVTVDDILLKEELDNFASKYPSQFKVYYVLNKPPNEWNGGVGYITKDMIQTHCPAPARDIQILMCGPQPMNNTMTSYLNELGYTSKMQFVF	300

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip08g02571	300	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	9	299	IPR001834	GO:0016491
	Aip08g02571	300	ProSiteProfiles	Ferredoxin reductase-type FAD binding domain profile.	64	168	IPR017927	GO:0016491
	Aip08g02571	300	Gene3D	-	158	300	IPR039261	-
	Aip08g02571	300	Gene3D	Translation factors	58	157	-	-
	Aip08g02571	300	SUPERFAMILY	Riboflavin synthase domain-like	57	169	IPR017938	-
	Aip08g02571	300	CDD	cyt_b5_reduct_like	69	300	-	-
	Aip08g02571	300	PRINTS	Cytochrome B5 reductase signature	95	106	-	-
	Aip08g02571	300	PRINTS	Cytochrome B5 reductase signature	117	124	-	-
	Aip08g02571	300	PRINTS	Cytochrome B5 reductase signature	153	167	-	-
	Aip08g02571	300	PRINTS	Cytochrome B5 reductase signature	176	195	-	-
	Aip08g02571	300	PRINTS	Cytochrome B5 reductase signature	214	225	-	-
	Aip08g02571	300	PRINTS	Cytochrome B5 reductase signature	270	278	-	-
	Aip08g02571	300	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	176	195	IPR001709	GO:0016491
	Aip08g02571	300	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	214	225	IPR001709	GO:0016491
	Aip08g02571	300	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	270	278	IPR001709	GO:0016491
	Aip08g02571	300	SUPERFAMILY	Ferredoxin reductase-like, C-terminal NADP-linked domain	156	294	IPR039261	-
	Aip08g02571	300	Pfam	Oxidoreductase NAD-binding domain	177	282	IPR001433	GO:0016491
	Aip08g02571	300	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	9	299	-	-
	Aip08g02571	300	Pfam	Oxidoreductase FAD-binding domain	69	167	IPR008333	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip08g02571	Aip-Chr8	109122649	109131347	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip08g02571	54	300	NADPH P450 reductases	AT5G17770	68.826	4.25e-134	379

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip08g02571	K00326		-	gmx:100809584	452.595