Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02566 ATGATGGCAAAACCAGTTTCCAATTCCAATTCCCACTCACACCTAATTCCATTACTCATTTTGATCCTGTTCTTTTCCACCATCTTCCATCTCTCAGAGCAGTTACAATTTTCTCAGACCCAAACACTTCAAAACTTCCAGAACCTTCTCGGCTACCCCCAAGAACTTTTAACCCTCAACACCAACACAGACTTCTGCAACATTGAACCAACCCCACACTTCACACTCGTTTGCTATGAAGAAAATCTCACACAGCTGCATGTTGTTGGCAACGGTTTCAGTCCCAACGCATTGCCACAGAACTTCTCATCAGAAACACTATTCGCCACACTCGCCACACTCTCAAGCTTAAAAGTCCTCAGTCTCGTTTCTCTTGGTCTCTGGGGTCCAATACCTCAAACCATTTCTCAGTTATCTTCTCTTGAAATACTCAACATAAGTTCAAACCATTTCAGTGGTGTTGTTCCGTCACAGATTTCACTTCTCAAGAACCTTCAATCACTGGTTCTTGATAACAACCTTTTAGAAGGCGTTATTCCAAGCGAAATAGGGACTCTTCAAGGCTTGGCTGTGCTTAGTATGAAGAACAATTCGCTCAGTGGAACCGTTCCAGATTCAGTTAGAACATTACAAACACTGCGAGTTTTGGATTTGTCAAATAACAAAATCTCAGGGGATTTACCTAGCCTTCGCCATCTGTCGAACCTTCAAGATCTTAACCTGGAGAACAACAAATTCGGGCCTCATTTTCCATCTCTTCCAACTAAATTGGTTTCGCTTGTTCTAAAGAATAACAGCTTTAAGCTTGGTCTTCCTTCGGGTTTAGTCACTTTCTACCAGCTTCAGAAACTCGACGTTTCGCTTAACGGTTTCGTTGGGCCGTTCTTACCTGCGTTGTTATCTCTTCCTTCTCTTAATTACCTTGATGCTTCCTCAAACAAGTTCACCGGAATGCTGTTCAAGAACGACACGTGTAATGATGAGCTTGTTTTCGTGAACTTGTCTTCGAATCTGTTGAGAGGGGAACTTCCCACATGTTTGAAACCGGTCGTTCTATACGCCGGGAATTGTTTATCGAACGACGACGGCCGGAATCAGAACCCTGCCAGCTTCTGCAGCAACGAGGCTATTGCTGTTAAAATCATGCCTCCTCAAGAGAATCACAAGAGGACAACCGGAAAAACGGTTCTCGTGTCCAGTATGGGAGGGATAGTTGGTGGAGCATTGATTGTTGGAGTGGTTATTTTGGTAGTTAGCCGGGTTCATAAGAAGGGTAGTGTTGTAAAAACACCTGTGAAACCGACCTTGGAGATCGTTATCAGCCAGGCGAAAAAGGAAGAGGAAGACGAAGACAAAGAGGAAGAAGAAAAGGAAACGGAAAAGGAAGGCATGGTAGCTGCTTCTTCAAGATCCTTGTCCATATCCGTGTTGCAGCGGATCATGAAAAGGGTGCCGGATAAGGGCGCTGTGGAGTCGTTTACAAGGTCCATGAAGGAGCATGTCATGAACAGAATGCATAACAAAAATGGTGTGAGGACAAGTACAAGGTCTATAATAGAACATGCATCTTCAGTGAACACTGCAAAGCTGCTCACAGATGCAAGGTATATATCAGAAACAATGAAGATGGGAGCCAGCTTTCCAGCTTACAGAACCTTTGCTTTGGATGAACTGAAGGAAGCTACAAATAATTTTGATGCATCAAGTTTCGTTAGTGAGGGTCCACATGGCCAGATATATAAGGGGGTGCTCTCCGATGGAATGCCTATTACAATCAGAGGATTGAAAATGCGAAAGAGACATAGCCCTCAAAATTACATGCACCACATTGAGTTGATTTCGAAACTTCGGCATTCACACTTGATCAGTGCTCTTGGTCATTCATTTGAATGCAACCAGGATGATTCAAGCGTCAGCACTATATTCCTCATATTTGAGTTTGTTCCAAACAAGAGTTTAAGGAGTTATGTGTCTGGATCTCCTAGTGAAAAGCTTTCTTGGACGCAGAGGATATTAGCTGCGATTGGAGTGGTAAAAGGCATTCAATTCTTGCACACAGGGATAGTGCCTGGACTATATTCCAATAATCTGAAGATAACTGATGTTCTTTTGGATAACAATCTTAATGTTAAAATAAGCAGTTATAATCTGCCACTCTCTGCAGAAACTAGAAGACTGGTCACCAATGGACCTTACCCTGGATTAAAAGGAAACTTCCAAGAAAGGATAATGGATGCAGACAAGAATGATGTCTATGATATTGGGGTAATCTTGCTTGAAACCATTTTGGGTCGACCATTGATGTTCCACAATGAAGTTGGCACTCTCAAAGATCTTTTACAAGTAAGCATAAAAACTGATGATATAGCAAGGAGGAGTATTGTTGACCCAGCAGTTCACAAGGAATGCTCAAATGAATCATTAATGACAATGATGGAGATTTGTGTAAGGTGCCTCTCCAATGATCCTACTGAAAGGCCTTCTGTGGATGATGTTCTCTGGAATCTGCATTTCGCTGTGCAAGTTCAGAATTCTTGGAGGAGAGACTCTAATGATCAGAGAGGCTCACCCGCATCATCATCCTCCCATGAGACAAGAGTTGTATGA 2607 0.4269 MMAKPVSNSNSHSHLIPLLILILFFSTIFHLSEQLQFSQTQTLQNFQNLLGYPQELLTLNTNTDFCNIEPTPHFTLVCYEENLTQLHVVGNGFSPNALPQNFSSETLFATLATLSSLKVLSLVSLGLWGPIPQTISQLSSLEILNISSNHFSGVVPSQISLLKNLQSLVLDNNLLEGVIPSEIGTLQGLAVLSMKNNSLSGTVPDSVRTLQTLRVLDLSNNKISGDLPSLRHLSNLQDLNLENNKFGPHFPSLPTKLVSLVLKNNSFKLGLPSGLVTFYQLQKLDVSLNGFVGPFLPALLSLPSLNYLDASSNKFTGMLFKNDTCNDELVFVNLSSNLLRGELPTCLKPVVLYAGNCLSNDDGRNQNPASFCSNEAIAVKIMPPQENHKRTTGKTVLVSSMGGIVGGALIVGVVILVVSRVHKKGSVVKTPVKPTLEIVISQAKKEEEDEDKEEEEKETEKEGMVAASSRSLSISVLQRIMKRVPDKGAVESFTRSMKEHVMNRMHNKNGVRTSTRSIIEHASSVNTAKLLTDARYISETMKMGASFPAYRTFALDELKEATNNFDASSFVSEGPHGQIYKGVLSDGMPITIRGLKMRKRHSPQNYMHHIELISKLRHSHLISALGHSFECNQDDSSVSTIFLIFEFVPNKSLRSYVSGSPSEKLSWTQRILAAIGVVKGIQFLHTGIVPGLYSNNLKITDVLLDNNLNVKISSYNLPLSAETRRLVTNGPYPGLKGNFQERIMDADKNDVYDIGVILLETILGRPLMFHNEVGTLKDLLQVSIKTDDIARRSIVDPAVHKECSNESLMTMMEICVRCLSNDPTERPSVDDVLWNLHFAVQVQNSWRRDSNDQRGSPASSSSHETRVV 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02566 868 Pfam Leucine Rich repeats (2 copies) 212 245 IPR025875 -
Aip08g02566 868 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 15 421 - -
Aip08g02566 868 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 514 857 - -
Aip08g02566 868 Pfam Protein tyrosine and serine/threonine kinase 571 833 IPR001245 GO:0004672|GO:0006468
Aip08g02566 868 ProSiteProfiles Protein kinase domain profile. 565 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g02566 868 SUPERFAMILY Protein kinase-like (PK-like) 544 838 IPR011009 -
Aip08g02566 868 SMART LRR_typ_2 138 161 IPR003591 -
Aip08g02566 868 SMART LRR_typ_2 233 260 IPR003591 -
Aip08g02566 868 SMART LRR_typ_2 162 186 IPR003591 -
Aip08g02566 868 SMART LRR_typ_2 302 322 IPR003591 -
Aip08g02566 868 SMART LRR_typ_2 210 232 IPR003591 -
Aip08g02566 868 ProSiteProfiles Leucine-rich repeat profile. 212 234 IPR001611 GO:0005515
Aip08g02566 868 MobiDBLite consensus disorder prediction 443 465 - -
Aip08g02566 868 Gene3D Ribonuclease Inhibitor 254 356 IPR032675 -
Aip08g02566 868 Gene3D Ribonuclease Inhibitor 37 203 IPR032675 -
Aip08g02566 868 MobiDBLite consensus disorder prediction 847 868 - -
Aip08g02566 868 Gene3D Transferase(Phosphotransferase) domain 1 648 861 - -
Aip08g02566 868 Coils Coil 436 463 - -
Aip08g02566 868 Gene3D Phosphorylase Kinase; domain 1 526 647 - -
Aip08g02566 868 SUPERFAMILY L domain-like 38 344 - -
Aip08g02566 868 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 15 421 - -
Aip08g02566 868 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 514 857 - -
Aip08g02566 868 Gene3D Ribonuclease Inhibitor 204 253 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02566 Aip-Chr8 109001994 109007291 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02566 467 862 Miscellaneous Gene Families AT3G03770 54.501 3.21e-137 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Aip08g02566 PK_Tyr_Ser-Thr 2.3e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02566 - - adu:107462774 1519.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g02566 08 109001994 109007291 Aip08g02566 08 109001994 109007291 ECH