Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02562 ATGGATGAATTTAGCAGTGGTGATCAAGCTCCTGAGTGGACCAGTAGCAGCAGTGACGATAGCTTTTCCTATGAGGATGAAGATTCTCATCAAGATGTTGAGAACATTGATAATGTTGAATCTAGCATAGAGAAAGATGATGACAAGGTTACTGCAACTATGCTATGGAGTTCTGAGTTTGACAAGGAGGTTCATGCCTATAAAGCTTATGTAAAGTATGCGAGAGATATGGGTTTTGCTGTCCGTAAAAGAGACTTGTCAAGAGATAAGGATGGGAATTTGAATAGAAAGTACTATGTTTGCAATCGCCAAGGGACAAGGGATCCAAAACACTATCGTCTACTTGATAGAAAGAGGAATCATAAGCCAGAGACAAGAACTGGTTGCAAGGCACGTTGTTTTATTTATTTGGATAAGTTGTCCATGAAATGGAGAGTTAAGACACTAGAAGAGGAGCACAACCATCCAATGATCCCAGAACAATTTGTTCATTTAATTTCTAACCATCGGAAGTTGACTGAGGCTGACAAAGCCCGGATTGTTTGCATGAAGGAATCTGGGTTTCAAACTTCTCAAATTGTTGGGTTTTTGGCTAAGCTTGCTAGTGGCTATAGTAACCTTAATTTCACGAAGAAGGATGTTTATAACTTTATTGATCCAGATAGGCGTGCAAAGATAGAGAACGGAGATGCTGTGGCAGCAATAAGTTATCTCCAGGGTAAGGCAGATGTGGACCCAATGTCTGTTGCTCGTTATACACTAGTCAACGGTAACAAATTGGGCAATCTTTTCTGGGCTGATGGACTTATGATCAATGACTACCAATACTTTGGAGATGTGTTAGCTTTTGACTCCACTTATAAGAAGAATAGATATAATAAACCTGTAGTGATTTTCTCTGGATCAAATAATCATCGCTTGACTTGCATATTTGGGTTTGCTGTGCTTGCCAATGAAAGTCGAGATACCTACATATGGTTGCTGAAGGAATTTTTGGATGTCATGATGAACAAGGAACCAAGTGTTGTAGTGACTGACGGCGACGATCAAATGCGACAAGCAATAAAGGAGGTCTTCCCTAGCACGACACATAGGCATTGTGCATGGCACATTGAGAAAAATGCAAATAGTCACATCAATGATCGGTCTCTTTTGGATGCTTTTAAGGTATCGATGTATGCTAATATGATGGTACCCCAATTTGAAGCTTACTGGGAAGAAATGATTCAGAAATTTGATATTGATGAGGACCACTGGCTTTTAACCAAATATGCCAATAAGGCAATGTGGGCCACTGCATACCTATGCGGAAAGTTTAGTGCAGGTGTTAGAACAACATCTCGATGTGAAGGTATAAACTCTTTCCTAAAAAGGTTTATTAAGTCACAGGAAACCTTGCTTGCGCTTGTGGAAAATCTAGAGCGCGTGGTTAAAGAGTACCGTAACAATGAACTTGTTGCTCAATTCAAGTCTATGTATAGTAAGTCAGTGCTGACTACTGGGTTGGACTCCATTAAGCAGGCTGCAGCAAGGGTTTACACTGCAGAAGTATTTCCAGAGGTGAAGGATCAACTAGCAAAAGTTGTTGCACTAAAGCATGTTGGCAAAAGTGGTATGGGCAGTAATATTGTTCATTGTGTTGCAAAATTTAGACGACTAGGTAGACTTTATCATGTTCTTCATGATGATACTTCAGAAAGGATTGAATGTGAATGTCAGCATTCACAACAAAGTGGCATACCATGCAGCCATATATTTTGTGTCATGAGACATGAGGATATTTGTGAATTGCCTGAACATTTGGTTTTAAAGAGATGGCGAAAAGAAGCAAATGCATACTTAAATGAAGAAGTTGACGATGGAAAAGACCCGAAGAGAGCGTTTGCTCTCTGGTACGGTTCCTTGTGGTCGGGGTCAATTTGGATGAACTTTCTTGTCGCAAAAACTACACCAACTTATCGCCATACAATTGGATGTGTTAATGGCATTATAAAGGATTTGGAGAAGAGGTTATGCTTGGTCGAAAACGTGAGTAGGCCAGTCAAAGATATTCAGGACCTTGAGATTGTGAAGATAAGGGGTGCGCCAAAACTCAACAAGAAATTCAAGGGATTGAAGACAAGGAACTGCTCCCGTTGTGGGCAAACTGGTCACACCCGAAGAACATGTCATAATGTAGAATCTGAAAAGCATTGTTTGACTGGAGATAATGGCTCTGAAGGCGAAGGGCATGGCAGTAGGTTTGAAACAGGACGGCATAATAGTCATGATGATGATGTCGCGGCCAAGCAAGGATCACTTTCAAGCAAGTTTGGTTTGTATAGCGCAGAAGAGCAACACATTAACCAAGTTCATGCTATGAATGCAATGCCATCTTCATCTACATCTCCGATTGCTAAAGTAATGCCATTTGCCAATGCCATGTATTCTAATGCTGGAACAGATGTGTTCTCCTTTGTTCCTAGCCATCAATGGCATTTTCAGGTTGTTTAA 2493 0.4059 MDEFSSGDQAPEWTSSSSDDSFSYEDEDSHQDVENIDNVESSIEKDDDKVTATMLWSSEFDKEVHAYKAYVKYARDMGFAVRKRDLSRDKDGNLNRKYYVCNRQGTRDPKHYRLLDRKRNHKPETRTGCKARCFIYLDKLSMKWRVKTLEEEHNHPMIPEQFVHLISNHRKLTEADKARIVCMKESGFQTSQIVGFLAKLASGYSNLNFTKKDVYNFIDPDRRAKIENGDAVAAISYLQGKADVDPMSVARYTLVNGNKLGNLFWADGLMINDYQYFGDVLAFDSTYKKNRYNKPVVIFSGSNNHRLTCIFGFAVLANESRDTYIWLLKEFLDVMMNKEPSVVVTDGDDQMRQAIKEVFPSTTHRHCAWHIEKNANSHINDRSLLDAFKVSMYANMMVPQFEAYWEEMIQKFDIDEDHWLLTKYANKAMWATAYLCGKFSAGVRTTSRCEGINSFLKRFIKSQETLLALVENLERVVKEYRNNELVAQFKSMYSKSVLTTGLDSIKQAAARVYTAEVFPEVKDQLAKVVALKHVGKSGMGSNIVHCVAKFRRLGRLYHVLHDDTSERIECECQHSQQSGIPCSHIFCVMRHEDICELPEHLVLKRWRKEANAYLNEEVDDGKDPKRAFALWYGSLWSGSIWMNFLVAKTTPTYRHTIGCVNGIIKDLEKRLCLVENVSRPVKDIQDLEIVKIRGAPKLNKKFKGLKTRNCSRCGQTGHTRRTCHNVESEKHCLTGDNGSEGEGHGSRFETGRHNSHDDDVAAKQGSLSSKFGLYSAEEQHINQVHAMNAMPSSSTSPIAKVMPFANAMYSNAGTDVFSFVPSHQWHFQVV 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02562 830 PANTHER OS02G0262500 PROTEIN 52 614 - -
Aip08g02562 830 Coils Coil 463 483 - -
Aip08g02562 830 Pfam MULE transposase domain 280 374 IPR018289 -
Aip08g02562 830 ProSiteProfiles WRKY domain profile. 84 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip08g02562 830 MobiDBLite consensus disorder prediction 1 20 - -
Aip08g02562 830 Pfam FAR1 DNA-binding domain 70 158 IPR004330 -
Aip08g02562 830 ProSiteProfiles Zinc finger CCHC-type profile. 710 723 IPR001878 GO:0003676|GO:0008270
Aip08g02562 830 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 52 614 IPR031052 GO:0006355
Aip08g02562 830 MobiDBLite consensus disorder prediction 1 44 - -
Aip08g02562 830 MobiDBLite consensus disorder prediction 733 760 - -
Aip08g02562 830 ProSiteProfiles Zinc finger SWIM-type profile. 557 593 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02562 Aip-Chr8 108718096 108720789 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g02562 MULE 2.2e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02562 - - aip:107611415 1592.79