Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02558 ATGATGTCACCACAAGGGGTGAAGCCTGGGGTGGTGAGGCCAGATCTGGTGCATCAGAGGGATGCAAACACATTTGGGAGCTTAGAGAGCACAACAGAATGGCTTGAAGTTGTTTTCAACATTATTGTATTAACTAGTGGCCTTCTTCTTGTCACTATGTTGATTGGAAACATTAAGGTTGGATTGGCAATGTCACCACTTAGCAATAATTCACTTTTCTTGGACTATTCTCGCAATCGATTGCCCATGTTTTTCCAGCGAGGTCTGAGTGTCTCTCTTTCTACTGATGATCCTTTGCAAATTCATTTGACAAAAGAGCCCTTGCTTGAGGAATATAGCATCGCAACAAAGAACATGTGTAGGAAAGCAGCTGCAATAAAAATTCAGAAGCATGCTCGCAGATATGAAGCTAGGAAATCATATAGGAAACTCCACGCATCAGTTCTTACCTTACAAACAGCTTTAAGGGCAGTGGCATCCCATAAAGAGTTCAAGTATAGAAAACAGACTAAAGCCTCAATCATTATTCAGATGGAGGGAGAAGATGGCCAAAAGAGAACTCAGGAAACTGAAGATGGTAAATTTCTCTAG 591 0.4146 MMSPQGVKPGVVRPDLVHQRDANTFGSLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVGLAMSPLSNNSLFLDYSRNRLPMFFQRGLSVSLSTDDPLQIHLTKEPLLEEYSIATKNMCRKAAAIKIQKHARRYEARKSYRKLHASVLTLQTALRAVASHKEFKYRKQTKASIIIQMEGEDGQKRTQETEDGKFL 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02558 196 SUPERFAMILY Metallo-dependent hydrolases 58 119 IPR032466 -
Aip08g02558 196 SMART iq_5 143 165 IPR000048 GO:0005515
Aip08g02558 196 SMART iq_5 120 142 IPR000048 GO:0005515
Aip08g02558 196 ProSiteProfiles IQ motif profile. 121 150 IPR000048 GO:0005515
Aip08g02558 196 PANTHER AMP DEAMINASE 59 117 IPR006329 GO:0003876|GO:0032264
Aip08g02558 196 ProSitePatterns Adenosine and AMP deaminase signature. 92 98 IPR006650 GO:0009168|GO:0019239
Aip08g02558 196 PANTHER AMP DEAMINASE 59 117 - -
Aip08g02558 196 Gene3D - 38 134 - -
Aip08g02558 196 Pfam AMP deaminase 59 117 IPR006329 GO:0003876|GO:0032264
Aip08g02558 196 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 169 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02558 Aip-Chr8 108559815 108562329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02558 118 179 Myosins gene family AT1G54560 58.065 2.01e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02558 K01490 - gmx:100793831 109.383