Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02554 ATGGAGTGCCCTTTTCGGTTGACCAACGTGGTCGCAAACCTGTCACCAACAACTCCAGCACACTGTCGTCGTCGGTCAAGCCTGGTCGTCGCCGTTCAATGCTTCGTCTTCCTGGAGGAAACAACTAAGACGAAGGGATTGCAGGGGTTCTTTCTTTTCGGAAGAAGGATGCAACTTGAGAGAGAATACGAAACAGGGATGAAAACCAAGCGTTATGCAAAGAGGTTTTGTTTAGGAATCCAATTTTTGAGCTTTGCATGTAAGGTTTTCATGTTGTTAAGGGTGTTGCATATTGGCAAGTCTGAGACACGTGGTCACAATTTCGTCCTCAATGCAAAGTTTGCTGAAATTGATGCTGCAAACTATGACGAGCTGCTGTTACTGGGTGGAAGAGCGCCAGAGTATCTTGCTCATGAACCTCTTGTTGTGGCACTGGTGATCAAGTTTTTCAGTTCTGGAAAAGCACTTGCTTCCATTTGCCACAGACAGTTGATTCTGGCGGCTGCAGGTGTAGCTAAAGATCGCAAGTGCACTGCTTTTCCTCCTGTTAAACCGACATTGGTTGCCTCTGGTGCTCGTTGGGTTGAACCAGACACCATGGCAGCAACAGTGGTGGATGGTAATCTCATTGCTGCCGCCACTTATGAAGGGCACCCTGAATTTATTCAGCACATTGTGAAGGCACTAGGAGGCAACATAAAAGGACTTAAACATAGAGAGTTTGAGGTCTCACTTGCTGATCTTCAAGGGGATGAGGACCATGCCTTCAGGAAGATTAGACTGAGGGCAGAAGATGGAATGGATTTTACTACTGACAAACTGAGGTCACTTGTTAAGAAATGGCAAACTTTGATTGAAGCTCATGTGGATGTGAATACCACTGATAATTACACTTTGAGGATGTTCTGTATTGGGTTTACCAAGACACGTTTTAACCAGATGAAAAGAACCTGCTATGCTCAATCAAGCCAGATTCGTCAGTCTGATCACGGAGATGAACAACATTACAGCAGTTTAGTTATCTTCTGTGGTCACCACATTTTAAAGAAGCAGCACAAAGAGGAAGTGACAACTTTGAAGGATGAACTTGGAGATATGAAGGCCAACCAGCAGCAACAAGAggaagagattcatggattgcggattatggtttag 1155 0.4364 MECPFRLTNVVANLSPTTPAHCRRRSSLVVAVQCFVFLEETTKTKGLQGFFLFGRRMQLEREYETGMKTKRYAKRFCLGIQFLSFACKVFMLLRVLHIGKSETRGHNFVLNAKFAEIDAANYDELLLLGGRAPEYLAHEPLVVALVIKFFSSGKALASICHRQLILAAAGVAKDRKCTAFPPVKPTLVASGARWVEPDTMAATVVDGNLIAAATYEGHPEFIQHIVKALGGNIKGLKHREFEVSLADLQGDEDHAFRKIRLRAEDGMDFTTDKLRSLVKKWQTLIEAHVDVNTTDNYTLRMFCIGFTKTRFNQMKRTCYAQSSQIRQSDHGDEQHYSSLVIFCGHHILKKQHKEEVTTLKDELGDMKANQQQQEEEIHGLRIMV 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02554 384 SMART Ribosomal_S3Ae_2 211 362 IPR001593 GO:0003735|GO:0005840|GO:0006412
Aip08g02554 384 PANTHER DJ-1/THIJ/PFPI FAMILY PROTEIN 88 239 - -
Aip08g02554 384 Pfam DJ-1/PfpI family 102 227 IPR002818 -
Aip08g02554 384 Pfam Ribosomal S3Ae family 232 326 IPR001593 GO:0003735|GO:0005840|GO:0006412
Aip08g02554 384 Gene3D - 94 236 IPR029062 -
Aip08g02554 384 Coils Coil 349 376 - -
Aip08g02554 384 SUPERFAMILY Class I glutamine amidotransferase-like 101 231 IPR029062 -
Aip08g02554 384 PANTHER DJ-1 PROTEIN 88 239 IPR006286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02554 Aip-Chr8 108516298 108519662 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02554 234 327 Cytoplasmic Ribosomal Protein Gene Family AT3G04840 79.048 1.47e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02554 K18881 - gmx:100791599 202.216