Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02540 ATGGTTCTCCAGAAATCATCATCATCTATGGTGTTTAAAGTGAGGAGGAACCCAGCGGAGCTAGTGCCACCTGCTGGACCCACCCCCCATGAGCTCAAGCTTCTCTCCGACATTGATGACCAACAAGGTCTACGCATCCACTATGCAGCGGTTCATATCTTTCCTTTCAACCCTTCAATGGCAGGGAAAGACCCTGCCCATGTCATCAGGGAAGCGTTGTCCAAAGCACTTGTGTTCTATTATCCACTTGCTGGGAGGCTTAGGGAAGGTCCTAAGGGCAAACTTATGGTGGATTGCACTGGCGAAGGTGTATTGTTCATCCAAGCTGAAGCATATGTTACACTTGACCATTTTGGTGTTGATCCTCTTCCTCCATTCCCTTGCTTTCATGAGCTCCTCTATGATGTTCCATTTTCTAATGATGGAATTGTTAACTCTCCGCTCCTCCTTATTCAGGTGACACAGCTCAAATGCGGCAGTTTCATCTTTGCTATGCGTGTGAACCACACAATGTGTGATGGAAGTGGATATATTCAATTCATAAAGGCCATAGCAGAAATAGCCCAAGGTGCATCTAAGCCTAAGCTTCTCCCAGTTTGGTGTAGGGATCTTCTTTGTGCCAGAGACCCACCAAGAGTCACATTCATCCACCATGAATACAACCAACTACCGCTCGAAGATGACAACAAAAGTGTCTCCTTGAAACCCTGCCATGCTTCCTTCTTCTTTGGCTCCAAAGAGATTGAGGCATTGCGCTGCCTCTTCCCTCGTCACCATGTTCAATCTTCCACCACCTTCGATGTCCTCACTGCATGCCTCTGGCGTTGTCATACAGCTGCACTCCAATGGAAAAACCCCAATCAAGAGGTTCGCTTCATGTGCGTAGTCAATGCACGTTTTGAACCTTGCAGGCTTAGTCCTCCACTACCTGAAGGGTATTATGGCAACGCATTTGTGTTTCCTGCGGCAGTTTCTACTGCGGGGATGCTATGCGGGCAGCCCATGACCTATGCATTGGAGTTGGTGAAGAAAGTAAAGAAAGAAGCAACTGAGGAATATGTTCACTCTACTGCCGATCTAATGGCCATTAAAGGAAGGCCTCTATTCTCCTTGACAGGATCCTTTATCGTGTCAGACATCACAAAATCTGGGATAAGAGATGTGGATTATGGATGGGGTAAGCCTTTGTATTCTGGACCAGACAAGGCCGGTGTAGATAATATTCCTGGTTTGAGCTTCTATGTTCCATATACTAACGCTAAAGGAGAGCATGGTAGATTGGTTTTAATTTGCCTCCCAGAAGAAGCCATGAAAAGGTTTGAGAACGAGCTTAATGAAATGCTTCAGATCAAGGATGAATAA 1362 0.4618 MVLQKSSSSMVFKVRRNPAELVPPAGPTPHELKLLSDIDDQQGLRIHYAAVHIFPFNPSMAGKDPAHVIREALSKALVFYYPLAGRLREGPKGKLMVDCTGEGVLFIQAEAYVTLDHFGVDPLPPFPCFHELLYDVPFSNDGIVNSPLLLIQVTQLKCGSFIFAMRVNHTMCDGSGYIQFIKAIAEIAQGASKPKLLPVWCRDLLCARDPPRVTFIHHEYNQLPLEDDNKSVSLKPCHASFFFGSKEIEALRCLFPRHHVQSSTTFDVLTACLWRCHTAALQWKNPNQEVRFMCVVNARFEPCRLSPPLPEGYYGNAFVFPAAVSTAGMLCGQPMTYALELVKKVKKEATEEYVHSTADLMAIKGRPLFSLTGSFIVSDITKSGIRDVDYGWGKPLYSGPDKAGVDNIPGLSFYVPYTNAKGEHGRLVLICLPEEAMKRFENELNEMLQIKDE 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02540 453 Pfam Transferase family 14 446 - -
Aip08g02540 453 Gene3D - 8 222 IPR023213 -
Aip08g02540 453 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 447 - -
Aip08g02540 453 PANTHER ALCOHOL ACYLTRANSFERASE 12 447 - -
Aip08g02540 453 Coils Coil 437 453 - -
Aip08g02540 453 Gene3D - 235 451 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02540 Aip-Chr8 108002311 108006786 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02540 13 447 Monolignol Biosynthesis Gene Families AT5G48930 30.973 5.74e-48 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02540 K19861 - gmx:100795237 620.542