Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02522 ATGGTGCAAAGAGAAAGATCCAAGTTTTTATCTCCTGCAATGGCTGACCCACCTCCACCCAAGCGCCATAAAATTGTCAGAGGAGATGATGATTATATGCCCGGAAACATTCTTGAGATTGAGCTTTCTAAGTTTATGACCTTTGATCACGTGAAATGCAAACCTGGGCCTCGATTGAATCTTGTAGTTGGACCCAATGGTTCTGGAAAAAGTTCTCTCGTGTGTGCTATTGCACTTGGCCTTTGTGGAGAGCCTCCGTTGCTTGGGCGAGCAACTAGTGTCGGGGCATATGTGAAGCGGGGAGAGGAGTCTGGATCCATTAAGATTACATTGAGAGGGAATAACAAAGATGAGTGTATTGCCATTACTCGCAAAATAAATACTAACAACAAGTCTGAGTGGTTGTTAAATGGGAATATAGTTCCCAAAAGTAATGTAGCTGAAACTGTTAAAAGGTTTAACATCCAAGTCAGTAACTTGACTCAATTTTTACCGCAAGACAGGGTCTGTGAGTTTGCAAAGTTAACTCCAGTGCAGCTCCTGGAAGAAACTGAAAAGGCTGTAGGTGATCCACAACTTCCCGAGCAACATCGTGCACTAGTTCATAAAAGTTATGCATTGAAGAATATTGAAGTGTCTAAGGAGGGGCATTTAGGTACCTTGAATCTGTTGAAGAAACAAAATGCTGAACTAGAGAAGGATGTTGAGCGTGTCCGTCTAAGAGATGAGATTCTTGCCAAGGCTGAAACCATGAAAAAGAAATTGCATTGGCTTGAATATGACATGAAGAAGGCTCAATATTGGGAAGCTAAGCAACATGAGAATAATGCGGCAAAGGCAATGGAGGAGTCTGCAAAGTTACTAAATGATCTTAAGGATCCTATTAACAAACAGAAGGAGGAACAGACTGCACTAGATGCCAAATGGAAAAAGGTTGACAGCCGTATAAAAGAGAACTACAAGAAGCGGTCAGAACTTCTAGATAAAGAGAGCCAACTGGATGTGGAGATGCAAAGGAATTACAAGGATATGGAAGATTTGAGAAGACAGGAGGAAACTTGGCAAAAAAAACTTGAAAAAATTAGGGAGGAACTTGCTGCTTCTGAACTTGAACTTGAGAATCTAGGTCCTTCCGAACCTCGTCAACAAGAAGAGCTGCAAAGACTAAGAGCTAAAGCCTCTGATATTGATTATGAAGCTAAGCAAGTGATGAATCCTCGCATATCACAACTAGAGAGGGAAATAAGTTGTAAAGTGACATCCTTGAATGAATGTAAAAAAAGGTTGAGCGAAATGAACAATAAAATTACAAAATGTTTGCATGTATTGCAAAAAGCAGGGGCAGACAAAATTTTTGAAGCCTTTAAATGGGTCCAAGAACATCGTAAAATCTTCAATAAGGGGGTTTATGGCCCAGTATTATTAGAGGTGAATGTCTCAGATCAAGATCATGCTGCTTATCTAGAGGGTCAAGCTGCGCAATATATTTGGAAGTCTTTCATAACACAAGATCCTCGTGATCGGGACCTCTTGGTGCAGCACCTAAAGTTCTTTGATGTTCCAGTTTTAAATTATACCGGTGAAGTTGACCAACAAAGAGAGACTTTCAGAATTACTGAAGATATGCATGCCCTTGGCATTCACTCCCGGCTGGACCAAGTTTTTGATGCTCCTAGTGCTGTCAAGGAGGTTTTGATTCGCCAGTTTAATTTGGATCATTCTTATATTGGATCCAAAGATACTGATAAGAGGGCTGACGAGGTTCCAAAATTGGGAATTATAAATTTGTGGACACCGGAAAATCACTACCGGTGGTCTAAGTCTAGATATGGGGGTCATATCTCAGCCATGGTTGAACAAGTGGGAGATCCAAAGTTTATAGTGAATAGTTCAAATGCGGGAGAAATTGAGAAGCTGGAATCCCGGGAAAAGGATCTTGAAGGAAGTATTGCTACCTTGGAAGAAGATGCTAAAAGATCTCGAGATAAGCTAAAGGCCTTAATTAATGAATATGCTGATCTTCGTAGAAAGATGGAGGAGATTAATAAATTATTTCAACTAGAGAAACAAAAACGTGAAGGTATTCACAACCGTATTGGGAAAAAGAGAGCTGCACTGAAATCATTGGAGGAACCCATTGATAGAGATACTGAGATGGCAAAGCTTGTTGATCAGGCAAATAAACTTCACATTCTGAGATTCCGTAATGCAATGAAATTAAAGCAACTTCTCGTTGAGTGTGTTGCTTACAGAAGAAGCTTTATTGAACAACGGATGTCTTCGATTCAATTTGATGCTGAGATTCGAAAATTGGAGGCAGATTTAAAGCAGCATGAGAGGTCTGCCATTGAAGCAACTATACAATTTCAGAACCTTAAGAAAGAGACTGAGGCTTGTGAACGGCAGCTGACGGATTCTTTGAATCAAGCTGAATCAATTGCACCATTGACACCTGAGCTACAGAACGAATTTCGTGAGATGCCCACTACAATTGAGGATTTAAGTAATGCTATTCAAGAAACAATCTCTGAGGCCCGGGCAATATTTACACTTAATAATAATGCATTGGAGGAGTATGAGTATCGGCGACAAAAGATAGAAGAACTTGCAGAGAAAATTGCTGCAGAGGAGGAAGAATATGGAAGGTCTTCTACTGAAATAAAGGAAATTGAGGATAAATGGCTTCCAGCACTTCGAAACCTTGTGGCACTGATCAATGAAACTTTTAGCCGTAATTTTCAAGAGATGGCTGTTGCTGGTGAAGTTTCACTAGATGAGCATGATAAGGAGTATGCCCAATATGGAATTTGTATTAAAGTCAAATTCAGACAAAATGGAAAACTTGAAGTTCTTAGTGCTCATCATCAATCTGGAGGGGAGCGGTCAGTTTCAACTATCGTATATCTTCTTTCCCTTCAAGATCTTACAAATGTCCCATTTAGAGTTGTTGATGAAATCAACCAGGGCATGGACCCAATAAACGAAAGAAAGATGTTTCAGCAACTGGTCAGAGCTGCAAGCAAGCCGAATACACCACAGTGTTTCTTGCTTACCCCCAAATTGCTACCAGACCTGCAATATAGTGAAGCATGCACTATATTGAACGTGTTTAATGGCCCTTGGATTCCCCAACCCTCAAAGCTATGGGAGGAAGGTGAACGATGGAGTATTGTCACCGGTCTCTTGGGGGAAACCCATTGTTGA 3204 0.4061 MVQRERSKFLSPAMADPPPPKRHKIVRGDDDYMPGNILEIELSKFMTFDHVKCKPGPRLNLVVGPNGSGKSSLVCAIALGLCGEPPLLGRATSVGAYVKRGEESGSIKITLRGNNKDECIAITRKINTNNKSEWLLNGNIVPKSNVAETVKRFNIQVSNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPEQHRALVHKSYALKNIEVSKEGHLGTLNLLKKQNAELEKDVERVRLRDEILAKAETMKKKLHWLEYDMKKAQYWEAKQHENNAAKAMEESAKLLNDLKDPINKQKEEQTALDAKWKKVDSRIKENYKKRSELLDKESQLDVEMQRNYKDMEDLRRQEETWQKKLEKIREELAASELELENLGPSEPRQQEELQRLRAKASDIDYEAKQVMNPRISQLEREISCKVTSLNECKKRLSEMNNKITKCLHVLQKAGADKIFEAFKWVQEHRKIFNKGVYGPVLLEVNVSDQDHAAYLEGQAAQYIWKSFITQDPRDRDLLVQHLKFFDVPVLNYTGEVDQQRETFRITEDMHALGIHSRLDQVFDAPSAVKEVLIRQFNLDHSYIGSKDTDKRADEVPKLGIINLWTPENHYRWSKSRYGGHISAMVEQVGDPKFIVNSSNAGEIEKLESREKDLEGSIATLEEDAKRSRDKLKALINEYADLRRKMEEINKLFQLEKQKREGIHNRIGKKRAALKSLEEPIDRDTEMAKLVDQANKLHILRFRNAMKLKQLLVECVAYRRSFIEQRMSSIQFDAEIRKLEADLKQHERSAIEATIQFQNLKKETEACERQLTDSLNQAESIAPLTPELQNEFREMPTTIEDLSNAIQETISEARAIFTLNNNALEEYEYRRQKIEELAEKIAAEEEEYGRSSTEIKEIEDKWLPALRNLVALINETFSRNFQEMAVAGEVSLDEHDKEYAQYGICIKVKFRQNGKLEVLSAHHQSGGERSVSTIVYLLSLQDLTNVPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSEACTILNVFNGPWIPQPSKLWEEGERWSIVTGLLGETHC 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02522 1067 Coils Coil 270 290 - -
Aip08g02522 1067 CDD ABC_SMC5_euk 35 192 - -
Aip08g02522 1067 Gene3D - 36 217 IPR027417 -
Aip08g02522 1067 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 326 IPR027417 -
Aip08g02522 1067 Coils Coil 852 893 - -
Aip08g02522 1067 Gene3D - 862 1025 IPR027417 -
Aip08g02522 1067 Pfam RecF/RecN/SMC N terminal domain 37 1008 IPR003395 -
Aip08g02522 1067 Coils Coil 761 809 - -
Aip08g02522 1067 Coils Coil 214 241 - -
Aip08g02522 1067 Coils Coil 344 371 - -
Aip08g02522 1067 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 31 1063 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Aip08g02522 1067 CDD ABC_SMC5_euk 940 1042 - -
Aip08g02522 1067 Coils Coil 636 691 - -
Aip08g02522 1067 MobiDBLite consensus disorder prediction 1 22 - -
Aip08g02522 1067 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 749 1018 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02522 21 1056 Structural Maintenance of Chromosomes family AT5G15920 55.780 0.0 1138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02522 K22803 - gmx:100778678 1437.94