Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02508 ATGGAGGTATCCTTAAGTGATGCGGCTGTTGGTATCGGGGGGACTGAAACCGAGGCTGATAAGGAATCAGATCCGAAGGACCTAAGTGGTGAAGATGTGGCGAATGAGGATTTGGGTGAATATGAAGATGTCACCGAGTTAGATGTTGATGACATAAAGCAGATGGGGTGGGATAGTGTTGACGCAGCTTATAAGTTTTATAGGAGGCTGGGAAAGTATTATGGATTCGGCATCAAGAAGGGTTTGAGGGATCGAAGACACAATGACAGAGTTGATAGAAGGAGGATATACAGACTTGAGACACGGACCAATTGCAAGGCTAAGCTCTCCATTTACATGGACAAAACTGAGCATTATTGGAAGGTGCAAAAAGTTACGAGAGAACATAATCACGAATTAACACCTACGTCGATGGTTCATCTGATTTCCAACCATCATGAAATGACCGATGCAGCAAGGGCTCAGATTGATGGATTACGTGTGAGTGGCATTGCGACATCGAAGATTGTTAGATACATGGCAGGAATGGATGGCAGGTACTCGTTGCTGGGTTTCTTGAAGAAAGACGTGTACAACTACGCCGACAGAACCCGTCACGCTAACATATCGGATGGTGATGCGAATGCGGTTATTGTTTATCTGGAGGGAAAGGCTGGTTCGGACCCCATATCGGTAGCTAGATACAGTGTAACAAAAGATGAACGGTTGGCAAATTTAAtttgggctgataaagccagcagagctgattatcaacattttggagatgttcttgccttcgactcgacctataagaaaaacaagtaCAAAAAACCTGTTGTGATTTTTTCAAGCTCTAACAATCACAAGCAAACAATGATTTTTGGGTTTAGGCTATTATTTGACGATAGTGCAACTTCTTACAAGTGGATGTTAGAAAATTTGCTGGAGGTGATGTGCAAGAAGAAACCCTCTGTGGTCGTGACTGACGGGGATAAAGCAATTATTAAGGCCGTCAGATCAGTTCTTCCTGATTCAACACACCAATTGTGTGTGCTTGGAATATTGAAAAAAATGTGA 1056 0.3968 MEVSLSDAAVGIGGTETEADKESDPKDLSGEDVANEDLGEYEDVTELDVDDIKQMGWDSVDAAYKFYRRLGKYYGFGIKKGLRDRRHNDRVDRRRIYRLETRTNCKAKLSIYMDKTEHYWKVQKVTREHNHELTPTSMVHLISNHHEMTDAARAQIDGLRVSGIATSKIVRYMAGMDGRYSLLGFLKKDVYNYADRTRHANISDGDANAVIVYLEGKAGSDPISVARYSVTKDERLANLIWADKASRADYQHFGDVLAFDSTYKKNKYKKPVVIFSSSNNHKQTMIFGFRLLFDDSATSYKWMLENLLEVMCKKKPSVVVTDGDKAIIKAVRSVLPDSTHQLCVLGILKKM 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02508 351 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 101 349 IPR031052 GO:0006355
Aip08g02508 351 Pfam FAR1 DNA-binding domain 79 134 IPR004330 -
Aip08g02508 351 MobiDBLite consensus disorder prediction 17 33 - -
Aip08g02508 351 Pfam MULE transposase domain 256 349 IPR018289 -
Aip08g02508 351 PANTHER OS02G0262500 PROTEIN 101 349 - -
Aip08g02508 351 MobiDBLite consensus disorder prediction 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02508 Aip-Chr8 106974706 106975825 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g02508 MULE 3.8e-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02508 - - ahf:112730358 504.212