Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02484 ATGAATACTGAGGTATTACATGAGTTAGGGTTTCCTGGGTGTGGAAAGACTGATCATTATAGGAAGCATTGGCATACACATTGTCAGCGATCTGCTACGAGAAGTGGAAAAGTGGGAATCCAATGGAAAACCGCCGTTGAGTTTGCTGGAAGATATTGGAGAACTATTTGTTGTTGGTACTCGTGGTCAAAGAAGATAGATGTTGGAGGCAGGGTAACAGCGACTGGCGAAAACAGAGCAACTTATGACCTAAGCACAGGATCGGAGGCTGACGAATGTGAGACAGCAAGGCTTGAGTCAGGGCAATTAGAAGAAGTGGACATGACAAGGTTGGATACTGAGGAAAGTAGTAGGGTAGCAGATGATGCAAAAGATCAAGGATCTAGTTCAGCAACTGTGAGGTCAGTTGAAGAACCAAATAGTTCCAATCGCTGCGAGGCAGGGGTAACAACAGAAGATTTGGCTATTGCTGAGTTCGATTCAGTTGAGGAGGCATATGTAAGGTATGTGGAATATGCACGGGTTACCGGGTTTGCGGTTCGAAAGGGAGATTCGGGAAGAGATAATGAAGGTAATGTTGTGAGAAAATTTTTCTTCTGCAACAGAGAAGGATTGCGCGATAAGAAACATTACGAGAGGATTGATAGACAGCGGGCACACAAACCAATTACAAGAACCAATTCTAATGCTAGGTTTCTGGTTCATCTAGACAAGGGTTGTGGAAAGTTGAATATGAAGTCTTTCGTTGTGGATCATAACCATGAACTAGCCCCAGCAGACCACACAAATGTAATGGCACCACATCGGCACATGTCGGAAGGTGACAAGGCCCATGTTCATAGCTTGCATGAAGCAGGTTTCCAGACAACCCAAATCATGGGATTCTTTGCCTATCTCGCAGGTGGTTATCGCAATTTGCATTTTATAAAGAAGGATCTATATAACTATATCGATGATGTTCGACGTTCCCGCATAGTGGAGGGTGATACTGCTGCGGCCATTAGCTATCTTAAAGGGAAGATTGAACTTAATTCCCTAGTTGTGGTACAATACTCGTACTGTGCTGAGAACCATTTGGGTAATCTGTTTTGGTGTGATGGTCAAATGCAGCATGACTATGATTGTTTTGGTGATGTCTTGGCCTTTGACTCAACCTATAGAAAGAATTTATACAATAGGCCTTTGGTGATTATTTCAGGTACTAACCATCATAGACAAACCATTATATTTGGGTTTGGGTTGCTTGAGGATGAGAAGATTCCTTCTTATAAATGGTTGCTAAGGAGTTTTTTGGATGTAATGAGGCAAAAGGAGCCGATGGTTGTGGTTACTGATGGAGACAAATCAATGAAGAAGGCTATCCGGAGCGAGTTTCCTAATGCAACACACAGACCATGTAGTTGGCATCTTGCTTGGAATGTTGTCTCTAATATTAAGGATGCTAATTTCTGTAGTGCATTCAAGACTGCGGTGTATGGAAACTTTGTGGTTGAAGAGTTTGAGAACTATTGGGCGGAGATGGTTGAGAGCTTTGGTTTAGAGAATAATGATTGGATTGAAAAAACATACGAGAAGAGGGCGCAATGGGCGAACGCCTATCTGTGTGATAAGTTTTGTGCTAGAGTTAGAACAACATTGAGATGTGAGGGAATCAATTCATCCCTCAAGAAGTTTATTAGATCTGGAAATTGTCTACTTGAGCTCGTGGAGAACCTGGATCGTGTGGTGAAGGATTATCAGAATAATGAGTTCATGGCCGACTTCAAATGCTTGTATTCGGAACCGGTGATGACAACAGGGTTGGAAAGTATTGAGAAGGCTGTAAGCAAGGTGTATACGCGAGAAATATTCTTTGAGGTTAAGAAACAAATAGAGTCAGTTGCTGCATTGCTCGTGCTTCATCATGAGACTTATGGTACCATTCAAAAGTTCATGCTAAGGAAGTTCCGAAGGCCCCTTCGAGTTTATACTATTTTATACAATAGCAGTTCCAAAAATTATGAGTGCTCGTGCAAGTTGTGGAACAGTCTAGGGGTCCCTTGTAGTCATATATTTTGTGCGATGAAGGAACTTGAGATAGAGGCATTGCCAAGGCGATTAGTGCTTCGCAGGTCGTGTAAAGATGCAAAAACATTGGAGAAAGTTGGTGCGGTTCCAATGGCCGATCCGGAAAAGGCGTTTCGGGAACGTTATGGGTCCATGTGGAGTGCATCGGGCCCACGAGGCGGAAGGAACCGATTTAGGAGAGCAGGCGATGACCATGTCAACATGCTGGATCCAACTATTGTAAAGTCGAAGGGTGCTCCCAGGGGCAGCACGAACGCAAAAATAGGAAGGCGATGTAGAAGGTGTAATGGGCTTGGGCACGACCGTAGGAATTGTACTGCGAGGAACGAACAACCAGATGATGAGGTAGTAGGAACTATGAACGGCCAGTATCAAACTTCTTGTAAAAGGGTTTGA 2463 0.4356 MNTEVLHELGFPGCGKTDHYRKHWHTHCQRSATRSGKVGIQWKTAVEFAGRYWRTICCWYSWSKKIDVGGRVTATGENRATYDLSTGSEADECETARLESGQLEEVDMTRLDTEESSRVADDAKDQGSSSATVRSVEEPNSSNRCEAGVTTEDLAIAEFDSVEEAYVRYVEYARVTGFAVRKGDSGRDNEGNVVRKFFFCNREGLRDKKHYERIDRQRAHKPITRTNSNARFLVHLDKGCGKLNMKSFVVDHNHELAPADHTNVMAPHRHMSEGDKAHVHSLHEAGFQTTQIMGFFAYLAGGYRNLHFIKKDLYNYIDDVRRSRIVEGDTAAAISYLKGKIELNSLVVVQYSYCAENHLGNLFWCDGQMQHDYDCFGDVLAFDSTYRKNLYNRPLVIISGTNHHRQTIIFGFGLLEDEKIPSYKWLLRSFLDVMRQKEPMVVVTDGDKSMKKAIRSEFPNATHRPCSWHLAWNVVSNIKDANFCSAFKTAVYGNFVVEEFENYWAEMVESFGLENNDWIEKTYEKRAQWANAYLCDKFCARVRTTLRCEGINSSLKKFIRSGNCLLELVENLDRVVKDYQNNEFMADFKCLYSEPVMTTGLESIEKAVSKVYTREIFFEVKKQIESVAALLVLHHETYGTIQKFMLRKFRRPLRVYTILYNSSSKNYECSCKLWNSLGVPCSHIFCAMKELEIEALPRRLVLRRSCKDAKTLEKVGAVPMADPEKAFRERYGSMWSASGPRGGRNRFRRAGDDHVNMLDPTIVKSKGAPRGSTNAKIGRRCRRCNGLGHDRRNCTARNEQPDDEVVGTMNGQYQTSCKRV 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02484 820 MobiDBLite consensus disorder prediction 104 147 - -
Aip08g02484 820 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 154 710 IPR031052 GO:0006355
Aip08g02484 820 Pfam FAR1 DNA-binding domain 169 257 IPR004330 -
Aip08g02484 820 MobiDBLite consensus disorder prediction 123 147 - -
Aip08g02484 820 Pfam MULE transposase domain 379 471 IPR018289 -
Aip08g02484 820 SMART 26again6 667 694 IPR006564 GO:0008270
Aip08g02484 820 ProSiteProfiles Zinc finger SWIM-type profile. 656 692 IPR007527 GO:0008270
Aip08g02484 820 PANTHER OS02G0262500 PROTEIN 154 710 - -
Aip08g02484 820 MobiDBLite consensus disorder prediction 104 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02484 Aip-Chr8 106399748 106403656 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g02484 MULE 5.5e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02484 - - ahf:112770305 1459.89