Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02483 ATGAATGCTAGCATGTGGCTTAGTAAGCAGAGACCCAAAAGTTTGTTTGACTTTGCTGACCATAGTAACTTAGCCCCCCGTGTTGTTTCGGGGGAGGATTCTAGTTGTCGATCATCTTGTGGTTCGAGCGCATTCGGTACAGTAGCAGATTCAGCCACTACTTTGTCATTTCAGGTCCGCAACAATTGCAGAGGCACTCAGCCTCATTCCAAGTCCGCGACATTCGCCGCCGTGTGGGTGGCTATCGACGTCGAAGCCGCCTTCGATCTGAGTAATTTAATTCCGCTATCGATCTGTCCTGTTAGCCGTTCTGCTAATCAGATATCTTGTCTCCGGTTTTTGGTATTAATAGTTAGTCTTTTTGAGAATGAGAATTTCTTTACACAGTGCTGCCGATTTGAGATGGAAAGCCATAGAGAAGAAAGTTCTGATTTCTCCGTCCAATGGACTGATGGATGGAGCACGGACTCAACGGATGACGACGAAGGAAGTACTGCACGGTCACTACAGACAGAGGAAGGTCAATCGGCAGCGGGGGATAGAGAAGATGGTTCAGTGGCAGGTGATGAGGGTTCCATGCCGGTACCAACAGGAATACATGTTGCGGCTGACAATCCATATGGTGACGAAGAATTGGGATCAACAGTTTTAACTACCGCTGCATTGGAGTCAGCTGAGTATAATAGTGTGGAAGAGGCGTACAAAGAATATGTGGCTTTTATGAAGGCGACTGGATTCGCTAAGCACTATAAGAGGGTCGATAGGAAGAGGGCTCATAAAGCAGAGACCAGAACCAATTGTTATGCCAAGTATGTTGTATACTTGGACATGAGTTCTAGAAAGTGGAGGACAAAAACGTTAATTGTGGATCATAATCACGATTTGGCCCCACCAGATTTCACCAACGTAGTGGCGCCGCATTGGAAGCTGACTGATGGAGACAAAGCTCACATACACAGCATGCATGAGGCTGGATTCCAGACAACTCAAATCATGGGGTTCTTTGCTCACTTGTGTGGTGGATATCGGAATGTCAACTTTATCAGGAAGGATTTGTATAACTATATGAATGATGTTCGGCAATCCCGCATTGTTGAAGGGGACGCTGCGGCAGTAATTAGTTATCTAAAGGGTAACACTGAGATGGATCCGTTAGCAGTTGTAAAATATTCGTACTGCGCTGAGAAGCATCTAGGTAATCTTTTTTGGTCAGACGGCCACATGCAATATGATTATGAGTGCTTCGGAGATGTATTGGCATTTGATTCCACTTACAAGAAGAATCTATACAGCAGGCCTCTGGTTATTTTTTCCGGTACTAACCACCATAGGCAGACTATTATGTTTGGATTTGGTTTGCTAGAGGATGAAAAGATTCCCTCTTTCAGCATACTTCCTACTTAA 1404 0.4501 MNASMWLSKQRPKSLFDFADHSNLAPRVVSGEDSSCRSSCGSSAFGTVADSATTLSFQVRNNCRGTQPHSKSATFAAVWVAIDVEAAFDLSNLIPLSICPVSRSANQISCLRFLVLIVSLFENENFFTQCCRFEMESHREESSDFSVQWTDGWSTDSTDDDEGSTARSLQTEEGQSAAGDREDGSVAGDEGSMPVPTGIHVAADNPYGDEELGSTVLTTAALESAEYNSVEEAYKEYVAFMKATGFAKHYKRVDRKRAHKAETRTNCYAKYVVYLDMSSRKWRTKTLIVDHNHDLAPPDFTNVVAPHWKLTDGDKAHIHSMHEAGFQTTQIMGFFAHLCGGYRNVNFIRKDLYNYMNDVRQSRIVEGDAAAVISYLKGNTEMDPLAVVKYSYCAEKHLGNLFWSDGHMQYDYECFGDVLAFDSTYKKNLYSRPLVIFSGTNHHRQTIMFGFGLLEDEKIPSFSILPT 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02483 467 Pfam MULE transposase domain 418 464 IPR018289 -
Aip08g02483 467 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 247 462 IPR031052 GO:0006355
Aip08g02483 467 Pfam FAR1 DNA-binding domain 242 296 IPR004330 -
Aip08g02483 467 PANTHER OS02G0262500 PROTEIN 247 462 - -
Aip08g02483 467 MobiDBLite consensus disorder prediction 144 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02483 Aip-Chr8 106397061 106399313 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g02483 FAR1 1.1e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02483 - - ahf:112730459 621.313