Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02459 ATGGATCGGGCGGCGGTTACCGTCGGACCCGGCATGGACATGCCGATCATGCACGACAGCGACCGTTACGATCTGTACATCGAACGCGGCGACAAGATTGATGAAAATGTCAAGAGAGAAGTCATTAATCACAGGTCTTTGAGACACCCTAACATTGTTAGGTTTAAGGAGGTTATTCTAACACCTACGCATCTGGCCATTATGGAATATGCATCTGGAGGAGAACTGTTTGAGCGAATCTGCAATGCTGGGCGTTTCTCTGAGGATGAGGCTCGTTTCTTCTTTCAACAACTCATATCTGGGGTCAGCTACTGCCATGCAATGCAAGTTTGTCACCGGGACCTGAAGTTGGAGAACACTTTGCTGGATGGAAGCCCAGCACCACGTTTGAAGATATGTGATTTTGGCTACTCCAAGGTCAGGGTTTCTATGTTTTCCTGGTGTAATTGGTTAGGCAATCTTTTGTTTACCTTTAAATGA 480 0.4667 MDRAAVTVGPGMDMPIMHDSDRYDLYIERGDKIDENVKREVINHRSLRHPNIVRFKEVILTPTHLAIMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKVRVSMFSWCNWLGNLLFTFK 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02459 159 ProSitePatterns Serine/Threonine protein kinases active-site signature. 110 122 IPR008271 GO:0004672|GO:0006468
Aip08g02459 159 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2I 26 142 - -
Aip08g02459 159 Gene3D Transferase(Phosphotransferase) domain 1 73 150 - -
Aip08g02459 159 Gene3D Phosphorylase Kinase; domain 1 25 70 - -
Aip08g02459 159 PANTHER SERINE/THREONINE KINASE 26 142 - -
Aip08g02459 159 Pfam Protein kinase domain 31 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g02459 159 ProSiteProfiles Protein kinase domain profile. 1 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g02459 159 SUPERFAMILY Protein kinase-like (PK-like) 32 143 IPR011009 -
Aip08g02459 159 SMART serkin_6 23 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02459 Aip-Chr8 105421765 105424955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02459 32 138 CBL-interacting serine-threonine protein kinases AT2G26980 50.926 1.33e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Aip08g02459 Pkinase 7.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02459 K14498 - gmx:100806949 266.159