Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02457 ATGGCACTGTGCAGCCGAATCAGATCGGGAATTTCAGTCTTCAACAAATTAGCGTTCGCCGCTTCCCAGAGATCCACTCTCCAACGATCTCTCATTGCCCCTTCCAATTCCCTGGTCTCTAGAGGTTATGCCAATGTGCCAGGGGCAAAGGAAGATAAAGTTAAGGTGCCACTGGCTATGTTTGGTGGCTCTGGAAACTATGCCTCTGCTTTGTATATTGCAGCAGTGAAAGCTAATTCAGTCGAAAAGGTTGAGTCCGAGATTCTTCAGTTTGTTGAGGCAGTTAAGAACAGTACTAAAGTTTCCCAGTTCATAAGTGACTTGTCTGTGAAGAAAGATATTAGAGTAAAGGTTATTGAAGACATTGCTGGTCAATCTAAGTTTTCTGATGTTACAAAGAACTTCCTTGTCCTTGTCGCTGAGAATGGGAGGCTTAAAAACATTGAAACTATTGCAAAGAGGTATAGGGAGTTGGCAATGGCATACAAGGGAGAAGTGAAAGCCATTGTGACAACAGTGATTCCTCTTCCTGCCGAGGAAGAGAAGGCACTGAAGGAGACCCTTCAGCAGATGTTAGGCACTGGGGCAAAGGTTCATCTTGAGCAGAAGATTGATCCAAGCATACTTGGTGGATTAGTGTTGGAGTTTAGTCAGAAGGTCTTTGACATGTCTATTAAGACTAGGGCGCAACAGATGGAGAGGCTTCTACGAGAGCCCATCAGTATTGCTGACATATAG 738 0.4444 MALCSRIRSGISVFNKLAFAASQRSTLQRSLIAPSNSLVSRGYANVPGAKEDKVKVPLAMFGGSGNYASALYIAAVKANSVEKVESEILQFVEAVKNSTKVSQFISDLSVKKDIRVKVIEDIAGQSKFSDVTKNFLVLVAENGRLKNIETIAKRYRELAMAYKGEVKAIVTTVIPLPAEEEKALKETLQQMLGTGAKVHLEQKIDPSILGGLVLEFSQKVFDMSIKTRAQQMERLLREPISIADI 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02457 245 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 64 164 IPR026015 -
Aip08g02457 245 PRINTS ATP synthase delta subunit signature 63 82 IPR000711 GO:0015986|GO:0046933
Aip08g02457 245 PRINTS ATP synthase delta subunit signature 133 144 IPR000711 GO:0015986|GO:0046933
Aip08g02457 245 PRINTS ATP synthase delta subunit signature 144 158 IPR000711 GO:0015986|GO:0046933
Aip08g02457 245 PRINTS ATP synthase delta subunit signature 196 211 IPR000711 GO:0015986|GO:0046933
Aip08g02457 245 PRINTS ATP synthase delta subunit signature 211 229 IPR000711 GO:0015986|GO:0046933
Aip08g02457 245 PANTHER ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL 29 238 - -
Aip08g02457 245 Hamap ATP synthase subunit delta [atpD]. 59 238 IPR000711 GO:0015986|GO:0046933
Aip08g02457 245 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 198 217 IPR020781 GO:0015986|GO:0016020|GO:0046933
Aip08g02457 245 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 66 236 IPR000711 GO:0015986|GO:0046933
Aip08g02457 245 Pfam ATP synthase delta (OSCP) subunit 65 235 IPR000711 GO:0015986|GO:0046933
Aip08g02457 245 Gene3D - 63 156 IPR026015 -
Aip08g02457 245 PANTHER ATP SYNTHASE DELTA CHAIN 29 238 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02457 Aip-Chr8 105386683 105391135 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02457 79 245 Primary Pumps ATPases AT5G13450 51.744 7.40e-58 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02457 K02137 - gmx:100790990 388.652