Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02409 ATGAGCGACGAAATCGTGTCGGTGGAGGAAGCAGAAGCGATGGATTCGTCCGCCGCAGATGCGGACATAGATGCAGAAGCAGCGGTGAGGATTGTTGACGGGATAGGGTCGTTTGGCGCAATTGAATTTTCTTCCCTAACACCCATGGACGTCTTTACGACGGAGTTCACAAGCCTACAGGCAGCTTATGACTACTACAACAAATACGGTCGCATCAAGGGATTCTCGGTCAGGAGGTCCAAGGTGGGTCGCAGAACAAAGCAGGCGGCGGAGGGCGAAATCATTTGGCAGATATTTGTGTGCTCGAGGGAAGGCGAGCGAGATGGGAAACACATGCAGCGGGAAGACAGGAAGATGGATCCTCGACCGATCACGCGGTGCGGGTGTGAAGACCGGATTAAGGTCCACGTTGATGATGCCAGCGGGCGATGGTTTGTTGAACAATTCTATGACAACCATAATCATCCCATGCTGGATGCGAGGTTTAGAGGTCTGTCGCGGTCACACAGAGCAGTCAAGGAAAGCGATTTGCACCAAATCAATTCCATGAGGAAATCTGGGTTGCGGAAGCCGACGATTTTCCATGCCTTTGCCAATCAGTCGGGAGGATTCGAGACTGTAGGGTTCGAGATAAAGGACATATATAATGCGATAGAGAAGCAAAGGCGGGCTGGCGCGACAGATGCCGAGGTCGCGTTGAAGTTCTTGGGAACTTTAAGGGCCACTGATAATGGGATGTTCTGGAAGTACTCGCTGGATGTTGACAAGAGGCTGGAAAATCTCTTCTGGTACGATGGTACAAGTCGTTATGACTACATCGTTTTTGGGGCTGTCCTGGGTTTTAATGCAACGTACGGTCGTAACAAATACAAGTTCCATTTGGTAATATTCTCAGGGGTTGACCATCATATGAGGACGGTGGTGTTTGGCTGCGCCATCTTGAGCAACGAGAGCGAAGGAAGCTACGTGTGGTTGTTGCGGTCATTTCTTGAGGCAATGAAAGAAAAACAGCCGAAGTCTGTCATCACGGACGGGGACCTCGCCATGAAGAGTGCGGTTAGCACAGTTTTCCCCGGTGCACATCACAGGTTGTGTAGCTGGCATTTGCTAAGGAACGCCACTGGTAGAGTTGGACGGCCATGTTTTCTGAGGAAATTCCGTCTATGCCTCATGGGAGATCTAGAGGTCGACGAATTTGAGATAATATGGATGGATAGCATGGCCGACCACGGGTTGGAGGATCATCCGTGGATAGTGGACATGTATGCCAAGAAGCATTCATGGTCTAATGCCCATATCCGGGGGAACTTCTTCGCAGGACTGAAGACGAGATCGAGGTGCGAGGCGTTAAATATGCAGCTTCAAAAATTTATACACAACGGGTACAATCTGATGGAGTTTGTGGAGCACTTCCAACACTATTTGGAGTTCATGAGGAGGAGAGAACTAGTGGTAGACTACAAGTCTGCGTACGGCGAGCCTGTTGTAAAGACGAAACTCGAGGCCATTGAGCTGTTCGCTGCGACGGTTTATACAAGAGAGGTTTTCGAACTGTTTCGGGAGGTGCTGATGCTAGCCAGCAATGTTAGAGTTGTGTCTACCAAGAGAACGAGCACTTGTGTTTTGTTCGAGATTGCAATGTACTGCAAGCAGAGATCATGGGCCATGTCGTGGGCCGAGGAAGATGACGAATTCAGCTGTTCTTGTCAGCGGATGGAGTCCTTTGGGCTTCCTTATGTCCACATGGTTGGGGTTCTGGTTTATCTGAACATGACAGCTATCCCCAGAAGCCTAATACTTGAACGGTGGATGAAGAGGGCAAAGCAGCCGCGTGCACCCAACGAAGGAGTACGTGTTGGGGAGATCCCAGACGCGGCATACATGAGCATGCACGCGGCGATGCTGGATGATTGCAGGGAGCTGGTGAGCTTCTCTTGCCAATTCTTCGAGGACTACGTGAATGTGAAAACAAGGTTGGCAAAGGAGCGCCAATCCTTGCGGGAGAAACATCGCTAA 2016 0.504 MSDEIVSVEEAEAMDSSAADADIDAEAAVRIVDGIGSFGAIEFSSLTPMDVFTTEFTSLQAAYDYYNKYGRIKGFSVRRSKVGRRTKQAAEGEIIWQIFVCSREGERDGKHMQREDRKMDPRPITRCGCEDRIKVHVDDASGRWFVEQFYDNHNHPMLDARFRGLSRSHRAVKESDLHQINSMRKSGLRKPTIFHAFANQSGGFETVGFEIKDIYNAIEKQRRAGATDAEVALKFLGTLRATDNGMFWKYSLDVDKRLENLFWYDGTSRYDYIVFGAVLGFNATYGRNKYKFHLVIFSGVDHHMRTVVFGCAILSNESEGSYVWLLRSFLEAMKEKQPKSVITDGDLAMKSAVSTVFPGAHHRLCSWHLLRNATGRVGRPCFLRKFRLCLMGDLEVDEFEIIWMDSMADHGLEDHPWIVDMYAKKHSWSNAHIRGNFFAGLKTRSRCEALNMQLQKFIHNGYNLMEFVEHFQHYLEFMRRRELVVDYKSAYGEPVVKTKLEAIELFAATVYTREVFELFREVLMLASNVRVVSTKRTSTCVLFEIAMYCKQRSWAMSWAEEDDEFSCSCQRMESFGLPYVHMVGVLVYLNMTAIPRSLILERWMKRAKQPRAPNEGVRVGEIPDAAYMSMHAAMLDDCRELVSFSCQFFEDYVNVKTRLAKERQSLREKHR 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02409 671 PANTHER OS02G0262500 PROTEIN 50 659 - -
Aip08g02409 671 Pfam MULE transposase domain 278 372 IPR018289 -
Aip08g02409 671 Pfam FAR1 DNA-binding domain 64 158 IPR004330 -
Aip08g02409 671 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 50 659 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02409 Aip-Chr8 103091700 103093715 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g02409 FAR1 4.3e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02409 - - aip:107611349 1336.63