Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02402 ATGGAAGCCCATGACAAGTCAAGATCTGTGACCAAGGCTCCTGCCATGAAGGTAATGGGAACAAGAGCTGATGAGGAGACAATTGATAGATTAATTGAGACTGGAAACAGTGAGCAAATCTTCCAGAAGGCAATTCAGGAACAAGGAAGAGGACAAACGGACAAGGCTTCTATACTTGGGGAAGCCATCAATTACGTGAAACAGCTTCAAGAATGTGTAAAGGAGCTGGAAAAGCAGAACAATGATAATAAGAGGGGCCCAACAGAGCCAGTCATATTCCTCAACAAGACTCAGCTGCTGTGTCGGTACAACGAAGACAGCAGCAGCGAGGAGGAGGAGGAGGTGGAGGAGGATTGGCGTAGCAAGGAGGAAAAACAAGTGCTCCTAGATGTTGAAGCAAGAATGCTGGAGAAGGAGAAGGAGGTGCTGATTGAGATCCACTGCGAGAAAGAGAATGAAATTGAGGTGAAGATATTGGAGCAGCTTGAAGATATTGGTGTTATTTTTGAAAAGGCAACCAGCCTTTTCAAGAATCATTGGAACACCCACATCAAGAAAAAGTTCAAGAAATTGGGAATTGATCCTGTCACACACAAATTACTCTCTAATAACACCACTAACCAAAATCAAATCAAACCAGAACAACCACCACTTTAA 657 0.4353 MEAHDKSRSVTKAPAMKVMGTRADEETIDRLIETGNSEQIFQKAIQEQGRGQTDKASILGEAINYVKQLQECVKELEKQNNDNKRGPTEPVIFLNKTQLLCRYNEDSSSEEEEEVEEDWRSKEEKQVLLDVEARMLEKEKEVLIEIHCEKENEIEVKILEQLEDIGVIFEKATSLFKNHWNTHIKKKFKKLGIDPVTHKLLSNNTTNQNQIKPEQPPL 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02402 218 MobiDBLite consensus disorder prediction 1 24 - -
Aip08g02402 218 PANTHER BHLH TRANSCRIPTION FACTOR 51 167 - -
Aip08g02402 218 CDD bHLH_AtbHLH_like 51 77 IPR045239 -
Aip08g02402 218 Gene3D - 1 82 - -
Aip08g02402 218 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 51 167 - -
Aip08g02402 218 Pfam Syntaxin 16 79 IPR006011 GO:0016020
Aip08g02402 218 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 46 92 IPR036638 GO:0046983
Aip08g02402 218 Coils Coil 59 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02402 Aip-Chr8 102761368 102764906 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02402 8 79 SNARE and Associated Proteins AT3G03800 50.000 1.77e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02402 - K08486 adu:107459735 180.644