Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02394 ATGGTTTTGCAGATTGACGAAGAGCTTCTTCAGGAAGTGGTTAATATGGGATTTGACAGAAATCAATTGGTTGAATCTTTATGCAACAGGATCCAAAATGAGGGGGGGCTGGGGATGATTTGTTTAAAGAGCTATGGAGGCTGTGCAGGGCCATTAATGGATGTTCCTTGTGTTCAAGACAGAGTTTTCTATTTCCCTCATGGTCACATTGAATTGTTGCCAGAACCTACAGAACAAGATTTGAGGCAGATGAAGAACCAGAAATCTCCCAAATACGATCTTCCGTCGAACAAGATATTTAAAGAACAAGATTTTTTTCTCTTCTATCAGAAGGTCaataacttttattag 351 0.3846 MVLQIDEELLQEVVNMGFDRNQLVESLCNRIQNEGGLGMICLKSYGGCAGPLMDVPCVQDRVFYFPHGHIELLPEPTEQDLRQMKNQKSPKYDLPSNKIFKEQDFFLFYQKVNNFY 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02394 116 Pfam UBA/TS-N domain 5 34 IPR015940 -
Aip08g02394 116 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 4 27 IPR015940 -
Aip08g02394 116 CDD UBA_SnRK1_plant 5 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02394 Aip-Chr8 102553003 102554025 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02394 45 96 B3 DNA Binding Superfamily AT5G62000 51.923 3.82e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02394 K14486 - ahf:114925841 238.81