Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02381 ATGGAGTACCTAATTTCATCCCTACCCTATCGACGTCCTTTCACATACACAAAATCACAATCAAACGAGTTGCTCCTCTCTCCTTCATCGAGCTTCTCCGTCGCACGAGCTTCTTCTCCTTTCCTCACTCACAGCGCCACCGCCGCCACCCTAACAACCGCAGCTACCTTCTCCTTCTTCTCCTCTCTTTTAAACACTGAACCAGTAGCACATAGCCCCTGTCTCTCTCGTTCTTTCTCATTCGCAGAACAAATCAAGCTCAAGCTCCTGTTCTCTTCGTCTCAGGTGAGCTCCAGCACGCCGGCGCCACCTGTAGCAGCGTCTGTTCCCACCACCGTGCCTCTCTCTCCTTTTATTTCCACTCCATTCTGGCTCGGATATCTTTTCAGCGCCGCAGCCATCATCTCCTCCAGTCAATGCTTCCAGAAAGAAAGCAAAAAGGAAAAGATATTGAAGGTGAAGGTGTATGCGGACCGCATGTCCCAACCATCTCGTGCCGTTCTTATCTTCTGCAAAGTTAATGGAATAGAATTCGACGAGATTAGAGTTGAAATCTCCAAAAGACAGCAGTTATCTCCCGAATTTGCAGCTATCAACCCTTTCAAGAAACTCCCTGCTATTGTTGATGGAAGGTTCAAGCTATTCGAGAGACGTGTTCTTTTCTTCTTGGCAGTTACATTATCTAACTCTGACTTTCCAACACAGATTTCGTGGATGGAGAAGTTTTTGCGGAAGAGAACTGAGATCACTGCGCCTGTTCTAATGACACCAGAAGAACCACATTTTAATCCTAATAAGATGAAACATGGTGCTCCGGGAGATCAAATTTGCCATGCGGGTGACCTGGAAAACATAGTTGCTAATGCAGATGGAGTTGCAGAAGCAACAATTGTCGACAATCAGATACCACTGATTGGCCCCAATCCAGTAGTTGGAAGAGCCTTGGTGGTTCATGAGCTTGAGGATGACCTTGGAAAAGGTGGGAAGGAACTCAGCTTGAGCACTGGAAATGCTGGTGGAAGATTGGCATGTGCAAGTGAAGGCAGAACAGATGATGCCAAACGAAGGGGTGATGTATTTGCTCGAGCATTTTCTGCTCACTTGGCATGGTTGATGAAGGAGCCTGCTGCACATGGGAAATTAGGCCGAGCCAATTTATTGGAAATGAGGGAAGAGTGCTTGAGAGAGTTCCAGTTTGTTGATGCCTATAGAAGTATAAAACAGAGGGAAAACGAGGCATCACTTGCTGTTTTACCTGACTTGTTGATGGAGATTGATAGTATGGAACTATGGATGAgTCAGGAGATATCAAGATTAACTTTCAATGTGAAGCTTGATGCTGCCGATGCAATTTAG 1356 0.4602 MEYLISSLPYRRPFTYTKSQSNELLLSPSSSFSVARASSPFLTHSATAATLTTAATFSFFSSLLNTEPVAHSPCLSRSFSFAEQIKLKLLFSSSQVSSSTPAPPVAASVPTTVPLSPFISTPFWLGYLFSAAAIISSSQCFQKESKKEKILKVKVYADRMSQPSRAVLIFCKVNGIEFDEIRVEISKRQQLSPEFAAINPFKKLPAIVDGRFKLFERRVLFFLAVTLSNSDFPTQISWMEKFLRKRTEITAPVLMTPEEPHFNPNKMKHGAPGDQICHAGDLENIVANADGVAEATIVDNQIPLIGPNPVVGRALVVHELEDDLGKGGKELSLSTGNAGGRLACASEGRTDDAKRRGDVFARAFSAHLAWLMKEPAAHGKLGRANLLEMREECLREFQFVDAYRSIKQRENEASLAVLPDLLMEIDSMELWMSQEISRLTFNVKLDAADAI 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02381 451 CDD Cu-Zn_Superoxide_Dismutase 260 344 IPR001424 GO:0006801|GO:0046872
Aip08g02381 451 SUPERFAMILY Cu,Zn superoxide dismutase-like 259 345 IPR036423 GO:0006801|GO:0046872
Aip08g02381 451 PRINTS Cu-Zn-superoxide dismutase family signature 297 319 IPR001424 GO:0006801|GO:0046872
Aip08g02381 451 PRINTS Cu-Zn-superoxide dismutase family signature 322 348 IPR001424 GO:0006801|GO:0046872
Aip08g02381 451 PRINTS Cu-Zn-superoxide dismutase family signature 278 287 IPR001424 GO:0006801|GO:0046872
Aip08g02381 451 PANTHER PANTOTHENATE KINASE 343 436 IPR004567 GO:0004594|GO:0005524|GO:0015937
Aip08g02381 451 Pfam Glutathione S-transferase, N-terminal domain 152 218 IPR004045 -
Aip08g02381 451 Gene3D - 344 400 IPR035073 -
Aip08g02381 451 Gene3D Glutaredoxin 151 230 - -
Aip08g02381 451 Gene3D Superoxide dismutase, copper/zinc binding domain 251 343 IPR036423 GO:0006801|GO:0046872
Aip08g02381 451 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 151 232 IPR004045 -
Aip08g02381 451 SUPERFAMILY Thioredoxin-like 149 219 IPR036249 -
Aip08g02381 451 Pfam Copper/zinc superoxide dismutase (SODC) 260 345 IPR001424 GO:0006801|GO:0046872
Aip08g02381 451 PANTHER PANTOTHENATE KINASE 2 343 436 - -
Aip08g02381 451 SUPERFAMILY AF1104-like 345 429 IPR036075 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02381 Aip-Chr8 101343031 101347416 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02381 150 249 Glutathione S-transferase Gene Family AT5G41210 58.824 2.04e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02381 K24265 - qsu:112040755 169.088