Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02369 ATGGCCACTTCCGCCGCAACAACCGCCGCAGTGTCGCGCCAGCTCTCGCAGAAGGAGCAAGACATCCAAATGATGCTCGCAGCCGAGGTTCATCTCGGAACCAAAAACTGCGACTTCCAGATGGAACGCTACGTTTTCAAGCGCCGCAATGATGGTATTTACATAATTAACCTTGGCAAGACATGGGAGAAGCTCCAACTTGCTGCTAGGATTATTGTTGCCATCGAGAACCCGCAGGATATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGGGCAGTCTTGAAATTTGCCCAATACACGGGTGCGAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAGATGCAGACATCCTATAACGAGCCTCGCCTACTCATTCTGACTGATCCAAGGACTGATCATCAGCCCATTAAGGAAGCAAGGATGGTTCTGCAGATGAGGGGTACTATTCGTCCAGGGCTTAAGTGGGATGTGATGGTGGATTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGAAGAGGAATTACCAGCTGCCCCAGAATATGCCATTCAAGATTTTGGTGCTGCTGGCATTGCCGGCTTCCCTGCAGCTGATGGGGAATGGGGGGCTGTTACAGCTGAACAATCCTGGACTGAACCAGTTCCTCAACAACCCATTGCAGCTGCTCCTGCTAACTGGGCCCCAGACGCTGCTGCAGGTGATTGGGAGCCAGTTCCAGCTCCACAGGCTTCCGTTCCTACACCCGGAGGTGTTGCCCCCACTGGCTGGGAATAA 798 0.5175 MATSAATTAAVSRQLSQKEQDIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARIIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSYNEPRLLILTDPRTDHQPIKEARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEELPAAPEYAIQDFGAAGIAGFPAADGEWGAVTAEQSWTEPVPQQPIAAAPANWAPDAAAGDWEPVPAPQASVPTPGGVAPTGWE 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02369 265 Gene3D - 146 184 - -
Aip08g02369 265 Gene3D - 21 145 - -
Aip08g02369 265 PANTHER 40S RIBOSOMAL PROTEIN SA 10 143 - -
Aip08g02369 265 Pfam Ribosomal protein S2 25 120 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aip08g02369 265 MobiDBLite consensus disorder prediction 237 265 - -
Aip08g02369 265 PANTHER 40S RIBOSOMAL PROTEIN SA 10 143 IPR005707 GO:0003735|GO:0006412|GO:0015935
Aip08g02369 265 CDD RPS2 25 145 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aip08g02369 265 ProSitePatterns Ribosomal protein S2 signature 1. 22 33 IPR018130 GO:0003735|GO:0005840|GO:0006412
Aip08g02369 265 PANTHER 40S RIBOSOMAL PROTEIN SA 144 255 IPR005707 GO:0003735|GO:0006412|GO:0015935
Aip08g02369 265 SUPERFAMILY Ribosomal protein S2 17 165 IPR023591 -
Aip08g02369 265 PRINTS Ribosomal protein S2 signature 101 118 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aip08g02369 265 PRINTS Ribosomal protein S2 signature 52 61 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aip08g02369 265 PRINTS Ribosomal protein S2 signature 126 143 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aip08g02369 265 PRINTS Ribosomal protein S2 signature 22 40 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aip08g02369 265 PANTHER 40S RIBOSOMAL PROTEIN SA 144 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02369 Aip-Chr8 101071694 101074171 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02369 1 251 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 58.362 3.72e-108 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02369 K02998 - gmx:100818292 350.903