Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02368 ATGCAATTGCTGGAAGGCACACTTCTCGGAGGTATTGACATAATTAACCTTGGCAAGACACAGGAGAGGCTCCATCTTGCTGGTAGGATTATTGTTGCTGTCAAGAGCCCTCAGGATATCAAAGTTCGCACAATACACGGTGGTCCCATTAAAGAAGGTGCTCTTGGAAATATTCCGACCATTGCCTTGTGCGACACGGATTCTACAATGCGCTATCTTGATGTTGGCACTCCTGCCAATAACAAGGGGCAGCACAGTATTGGTTGTCTATTTTGGTTATTAAGTTGGACGTGA 294 0.4558 MQLLEGTLLGGIDIINLGKTQERLHLAGRIIVAVKSPQDIKVRTIHGGPIKEGALGNIPTIALCDTDSTMRYLDVGTPANNKGQHSIGCLFWLLSWT 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02368 97 SUPERFAMILY Ribosomal protein S2 10 95 IPR023591 -
Aip08g02368 97 PANTHER 40S RIBOSOMAL PROTEIN SA 43 94 IPR005707 GO:0003735|GO:0006412|GO:0015935
Aip08g02368 97 Gene3D - 42 97 - -
Aip08g02368 97 PANTHER 40S RIBOSOMAL PROTEIN SA 11 43 - -
Aip08g02368 97 PANTHER 40S RIBOSOMAL PROTEIN SA 43 94 - -
Aip08g02368 97 PANTHER 40S RIBOSOMAL PROTEIN SA 11 43 IPR005707 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02368 Aip-Chr8 100939366 100940533 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02368 11 95 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 44.853 2.52e-31 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02368 K02998 - gmx:100818292 110.538