Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02366 ATGGCCACTTCCGCCGCCACCACAACTGCCGCAGCGCCACGCCAGCTGTCACAGAAGGAGCAGGACATCCAGATGATGCTTGCTGCTGAGGAGAAGCTCCAACTTGCTGCTAGGATTATTGTTGCTATCGAGAACCCGCCGGACATCATTATTCAGTCTGCTAGGCCATATGGTCAGAGAGCTGTCCTTAAGTTTACACAATACACTGGTGCGAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAAATGCAAACATCCTATAACGAGCCTCGTCTACTCATTCTGACTGATCCAAGGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCCGACCATTGCCTTCTGTGACACCGATTCTCCGATGCGCTATGTTGGTTGTCTGTTTTGGTTATTAGCAAGGATGGTTCTGCAGATGAGGGGTACTATTCGTCCGGGGCTTAAGTGGGACGTGATGGTGGATTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGAGGAGGAATTACCAGCTGCCCCAGAATATGCCATTCAAGATTTTGGTGCTGCTGGCATTGCCGGCTTCCCCGCAGCTGATGGGGAATGGGGGGCTGTTACAGCTGAACAATCCTGGACTGAACCAGTTCCTCAGCAACCCATTGCAGCTGCTCCTGCTAACTGGGCCCCAGACGCCGCTGCAGGTGATTGGGAGCCAGTTCCAGCTCCACAGGCTTCCGTTCCTGCACCTGGAGGTGTTGCTCCCACTGGCTGGGATTAG 786 0.5204 MATSAATTTAAAPRQLSQKEQDIQMMLAAEEKLQLAARIIVAIENPPDIIIQSARPYGQRAVLKFTQYTGANAIAGRHTPGTFTNQMQTSYNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEELPAAPEYAIQDFGAAGIAGFPAADGEWGAVTAEQSWTEPVPQQPIAAAPANWAPDAAAGDWEPVPAPQASVPAPGGVAPTGWD 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02366 261 MobiDBLite consensus disorder prediction 222 261 - -
Aip08g02366 261 CDD RPS2 31 145 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aip08g02366 261 ProSitePatterns Ribosomal protein S2 signature 2. 94 118 IPR018130 GO:0003735|GO:0005840|GO:0006412
Aip08g02366 261 PRINTS Ribosomal protein S2 signature 94 111 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aip08g02366 261 PRINTS Ribosomal protein S2 signature 111 122 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aip08g02366 261 PRINTS Ribosomal protein S2 signature 69 86 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aip08g02366 261 Gene3D - 15 180 - -
Aip08g02366 261 PANTHER 40S RIBOSOMAL PROTEIN SA 31 253 IPR005707 GO:0003735|GO:0006412|GO:0015935
Aip08g02366 261 PANTHER 40S RIBOSOMAL PROTEIN SA 31 253 - -
Aip08g02366 261 SUPERFAMILY Ribosomal protein S2 31 161 IPR023591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02366 Aip-Chr8 100913469 100915468 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02366 5 253 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 57.095 9.55e-102 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02366 K02998 - gmx:100786575 327.02