LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip08g02359	ATGTTGCTGTTCTTGGAGAGATGGTGGATCGGATCAAGGTTTTGTGGCAGCGGAGCACAGCTTCTAAATGGCAAAATTGTTGCATTGAAGAAACTTCACCGAAGGGAGTCACAAAATCCATCTTTTGACAAGAGCTTCCGAAACGAGATAAAGATGTTGTCACAAACCCGTCATAGAAACATTGTCAAGCTCTATAGATTTTATGATGCAATTGGTGAAGCATATGACAAGACAGCCAAATGGCTTGGACTGAATTTGAAGAGAAGCGGTGGTCCTGCTATAGATGAGCTTGCTAAGGAGGAGAATGCCAAATCTTTAAGCTTTTTAGTTCCAATGAAGCAGCACAAAGATTGCAACTTCTCCTATGCTGGTCTAAAAACCCAAGGTTGGCAATCGAATCCAAAAAGATTAATGGTAGCTTGGACTGGCATTAAGCACTTTCGCATGGGAAGATATGACCCTCCTCCACCTGCAGAAGAATCAGAAAACTTCGTGTATGATTTGCGGTCGAGGTGGTCGCTAGGGGAAGAATATGCTGATGGAAGAAGTGAACCACGCTCAATAAAAGGGCTCGTCTTCATCCATCTCTTACAAGCTTGCCTTATACTTATTCGCGAAAGAGCAAAGCTTAAGGGAGAACTCATGCGTGCTCTAGGAGGGGCTATAGCATGTCCATCTCTTCTTGGAGTTCCTTTGGGACATAATTCGTCATTCCTTCAAAGGCCTGCATTTGCACCTCCTCGCATTAGGGAAGCCATTTGGTGTGGTAGCACAAACTCTTCAACCGAAGGAGGAAAGGAATTAGAGGATCCACAAGTGCTTACTGACGTTGGTGATGTCCCTATCCGAGAAATCCGAGACTGTGGAGTAAATGATGATAGATTGATGAATGTCATCAATGAATCTGTCAAGCTAGTGATGGAAGAGGCTCCATTACGACCCTTAGTTTTAGATGGCAATCACTCAATATCATATCCTGTTGTTCGAGCCGTCTCTGAAAAACTTGGAGGACCAGTTGATATTCTTTATCTTGATGCACATCTTGATATCTATCATTGCTTTGAAGGAAACAAGTATTCAGTGTACATCTCAATAGATGTGGATTGTCTTGATCCTGCTTTTGCTCCTGGAATGTCTTACATCAAACTGAGAGGTCTCTCTTTCTGCGATGTTCTCAACATCCTACATAACCTTCAAGGTGACATTGTTACCACAGACGTGGTCGAGTTCAATCTGCAACGTGATACAGTTGACAGTATGAATGTCATAGTAGCTGCTAAGTTGGTAAGAGAACTGACTGCCAAGATTGCAAAATAA	1317	0.4275	MLLFLERWWIGSRFCGSGAQLLNGKIVALKKLHRRESQNPSFDKSFRNEIKMLSQTRHRNIVKLYRFYDAIGEAYDKTAKWLGLNLKRSGGPAIDELAKEENAKSLSFLVPMKQHKDCNFSYAGLKTQGWQSNPKRLMVAWTGIKHFRMGRYDPPPPAEESENFVYDLRSRWSLGEEYADGRSEPRSIKGLVFIHLLQACLILIRERAKLKGELMRALGGAIACPSLLGVPLGHNSSFLQRPAFAPPRIREAIWCGSTNSSTEGGKELEDPQVLTDVGDVPIREIRDCGVNDDRLMNVINESVKLVMEEAPLRPLVLDGNHSISYPVVRAVSEKLGGPVDILYLDAHLDIYHCFEGNKYSVYISIDVDCLDPAFAPGMSYIKLRGLSFCDVLNILHNLQGDIVTTDVVEFNLQRDTVDSMNVIVAAKLVRELTAKIAK	438

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip08g02359	438	Gene3D	Ureohydrolase domain	225	357	-	-
	Aip08g02359	438	Gene3D	Ureohydrolase domain	358	438	-	-
	Aip08g02359	438	SUPERFAMILY	Arginase/deacetylase	227	434	IPR023696	-
	Aip08g02359	438	Pfam	tRNA N6-adenosine threonylcarbamoyltransferase	68	128	IPR000905	-
	Aip08g02359	438	PANTHER	ARGINASE 2, CHLOROPLASTIC/MITOCHONDRIAL	196	360	-	-
	Aip08g02359	438	PANTHER	ARGINASE 2, CHLOROPLASTIC/MITOCHONDRIAL	361	438	-	-
	Aip08g02359	438	Pfam	Arginase family	227	359	IPR006035	GO:0046872
	Aip08g02359	438	Gene3D	-	69	128	-	-
	Aip08g02359	438	PANTHER	ARGINASE/AGMATINASE	196	360	IPR006035	GO:0046872
	Aip08g02359	438	PANTHER	ARGINASE/AGMATINASE	361	438	IPR006035	GO:0046872
	Aip08g02359	438	ProSitePatterns	Arginase family signature.	364	385	IPR020855	GO:0016813\|GO:0046872
	Aip08g02359	438	ProSiteProfiles	Arginase family profile.	216	438	IPR006035	GO:0046872
	Aip08g02359	438	SUPERFAMILY	Protein kinase-like (PK-like)	20	69	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip08g02359	Aip-Chr8	100675844	100686908	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XI-1	Aip08g02359		Arginase	1.4e-17	CL0302

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip08g02359	K01476		-	qsu:111988645	307.375