Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02351 ATGGTGATCACCTCCGCTGTCACAGATCCTGAAGAACAAACACAAAGCTTGCACTCTACTTTTGCTTCCAGATATGTTCGTGACCCTATTCCCAGGTTCAAGATGCCAGAGAAGTGTATACCAAAGGATGCAGCATATCAGATCATAAACGATGAGTTGATGTTGGATGGAACACCAAGGCTTAACTTGGCATCTTTTGTGACCACTTGGATGGAGCCTGAGTGTGATAAGCTCATCATGGCTTCGCTTAACAAGAACTACGTTGCCATGGATGAGTATCCTGTCACCACTGAGCTCCAGAATAGGTGCGTTAATATGATAGTGCACCTATACCATGCTCCTATCGGTGATGATGAGGCTGCAGTTGGTGTGGGAACCGTCGGATCATCAGAGGCAATAATGTTGGCAGGTCTAGCTTTTAAAAGGAAATGGCAGGCAAAGAGAAAAGCAGAAGGCAAACCTTATGATAAGCCTAACATAGTTACCGGCGCTATTTGTGCAGGTTTGTTGGGAGAAGTTTGCACGTTGAAATGGTTGATGAGAACACCATCTGTGGTGGCAATTTTGGGGTCGACTCTGACCGGGGAGTTTGAGGATGTGAAGCTTATGAATGAGCTTCTTACTAAGAAGAATAAGAAGACAGGATGGAATACCCCGACTCATGTTGATGCTGCCAGCAGAGGGTTCATTGCTCCATTTCTCTACCCTGATCTTGAGTGGTATTTTCGCTTACCATTAGTGAAGAGCATCAATGTTAGTGGTCATAAGTATGGTCTTGTCTACCCCTGTGTCGGTTGGGTTGTTTGGAGGAGGAAAGATGACTTGCCAGAGGAACTTGTTTTTCACATAAACTATCTCGGATCGGATCAGCCAACATTTACCCTCAATTTCTCCAAAGGCTCTAGTCAAATTATTGCTCAATTTTACCAATTTATACGGCTTGGCACTGAGGGCTACAAAAATATCATGGAGAACTGCAGGGAGAACGCAAGAATTCTGAGGGAGGGAATCGAGAAAACGAGCCAGTTCAACATCGTCTCCAAGGACGCTGGCGTGCCGCTTGTCGCCTTCTCTTTGAAAGACAGCAGCCAACACAGTGTTTGA 1104 0.4538 MVITSAVTDPEEQTQSLHSTFASRYVRDPIPRFKMPEKCIPKDAAYQIINDELMLDGTPRLNLASFVTTWMEPECDKLIMASLNKNYVAMDEYPVTTELQNRCVNMIVHLYHAPIGDDEAAVGVGTVGSSEAIMLAGLAFKRKWQAKRKAEGKPYDKPNIVTGAICAGLLGEVCTLKWLMRTPSVVAILGSTLTGEFEDVKLMNELLTKKNKKTGWNTPTHVDAASRGFIAPFLYPDLEWYFRLPLVKSINVSGHKYGLVYPCVGWVVWRRKDDLPEELVFHINYLGSDQPTFTLNFSKGSSQIIAQFYQFIRLGTEGYKNIMENCRENARILREGIEKTSQFNIVSKDAGVPLVAFSLKDSSQHSV 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02351 367 Pfam Pyridoxal-dependent decarboxylase conserved domain 183 360 IPR002129 GO:0016830|GO:0019752|GO:0030170
Aip08g02351 367 Pfam Pyridoxal-dependent decarboxylase conserved domain 36 176 IPR002129 GO:0016830|GO:0019752|GO:0030170
Aip08g02351 367 Gene3D - 1 68 - -
Aip08g02351 367 Gene3D - 69 172 IPR015421 GO:0003824
Aip08g02351 367 Gene3D - 173 339 IPR015421 GO:0003824
Aip08g02351 367 SUPERFAMILY PLP-dependent transferases 14 362 IPR015424 -
Aip08g02351 367 PANTHER GLUTAMATE DECARBOXYLASE 182 367 IPR010107 GO:0004351|GO:0006536|GO:0030170
Aip08g02351 367 PANTHER GLUTAMATE DECARBOXYLASE 2 165 IPR010107 GO:0004351|GO:0006536|GO:0030170
Aip08g02351 367 PANTHER GLUTAMATE DECARBOXYLASE 182 367 - -
Aip08g02351 367 PANTHER GLUTAMATE DECARBOXYLASE 2 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02351 Aip-Chr8 100609192 100612427 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02351 12 367 Calmodulin-binding Proteins AT3G17760 74.474 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02351 K01580 - gmx:100796475 605.52