Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02343 ATGGGAACGCCTGTGAATATCATCGTCGGATCACATGTTTGGGTTGAGGATCCTGAGATTTCATGGATTGATGGTGTGGTGACAGAAATCCATGGCAAAAATGCTACCATCGTTACTTCAAATGGAAGAACTGTGGTGGCAGAGATTTCGAGTATTTATCCGAAAGATACAGAAGCGCCAGCAGCAGGAGTTGATGACATGACAAAGCTGGCATACCTCCATGAGCCAGGAGTCCTTCATAACCTTGCCATTCGTTTTTCTCTTAACGAGATATATACATATACAGGGAATATCTTAATTGCAGTGAATCCTTTTCGACGACTGCCACACTTGTATGATATCCATATGATGGAGCAATACAAAGGAGCAGCATTTGGAGAGCTTAGCCCTCACCTTTTCGCCGTTGCCGACACCTGCTACAGGGCAATGATAAATGAAAGTAGAAGCCAGTCCATTCTGGTGAGTGGAGAGAGTGGAGCTGGTAAAACAGAAACCACCAAAATGTTAATGAGATATCTAGCATTCATGGGAGGAAGATCAGGTACGGAAGGAAGAACGGTAGAACAACAGGTTTTGGAGTCCAATCCAGTGTTAGAAGCATTTGGAAATGCCAAAACTGTCAAAAATAACAATTCAAGTCGTTTCGGCAAATTCGTAGAAATCCAATTCGACAAGAATGGGAAAATTTCTGGAGCTGCAATTCGAACATATCTCCTAGAAAGGTCACGAGTATGCCAAGTGTCCGACCCGGAGAGAAACTATCACTGCTTTTACATGCTTTGTTCAGCACCACCAGAGGATGTCAAGAAGTACAAGTTGGGGAATCCAAAGCAATTCCACTATCTTAATCAATCAAACTGTTATGAAGTTTCAAATGTAGATGATGCAAAAGAATACTTGGAGACCAGAAATGCAATGGATATTGTAGGAATCAACCAGGAAGAACAGGATGCTATCTTTCGTGTGGTCGCCGCAATCCTCCACCTTGGTAACATTGACTTTGTCAAAGGGACTGAAGTTGATTCTTCCAAACTGAAAGATGAAAAATCACTCTTCCACCTTCGGACAGCTGCAGAGTTGTTCATGTGTGATGAGAAAGCATTAGAGGACTCACTTTGCAAGCGTGTCATTGTTACTCCTGATGGCAATATTACAAAACCACTCGACCCGGACTCGGCTTCTTTGAGCCGAGATGCTTTGTCAAAGACGGTTTACTCCAAACTGTTTGATTGGATTGTTGACAAGATTAACAGTTCAATTGGTCAAGACTCCAATGCAGTAAGCATAATAGGAGTCCTTGATATTTATGGGTTTGAGAGCTTCAAAATCAACAGTTTTGAGCAACTATGCATCAACCTAACGAACGAGAAGTTGCAACAACATTTCAACCAGCATGTATTCAAGATGGAGCAAGAAGAGTACACCAAAGAGGAAATCAATTGGAGCTATGTTGAATTTGTGGATAATCAAGATGTTCTTGATCTTATTGAGAAGAAACCTGGGGGAATAATTGCTCTTCTTGATGAAGCATGCATGTTCCCCAAGTCAACTCATGAGACTTTTGCACAAAAGATGTACCAGACATATAAAGCACACAAGCGCTTCAGCAAACCAAAACTTTCTCGGACAAACTTCACAATTAACCATTATGCTGGAGATGTCACATATCAAGCAGATTATTTCCTTGATAAAAATAAAGATTACGTAGTAGCGGAGCATCAAGCTCTTTTATGTGCATCCAAGTGCTCATTTGTTGCAAATCTTTTCCCTCCTTTACCTGACGAAACATCAAAGCAATCAAAATTCTCTTCCATTGGTTCTCAGTTTAAGCAACAACTACAATCTCTCATGGAGACACTGAACACAACAGAACCACATTACATAAGGTGTGTGAAGCCAAATACAGTCTTGCAGCCAGGAATCTTTGAGAACTTCAATGTCCTAAATCAGTTAAGATGTGGAGGAGTACTTGAGGCGATAAGGATTAGTTGTGCCGGATATCCAACAAAAAGAACATTTGAAGAGTTCCTTGACCGTTTTGGAATGCTAGCTCCGGATGTCCTTGATGGGTCGGATGAGAAAAAGGCAGCTATTGCCATATGTGATAAGATGGGATTAACAGGCTACCAAATGGGGAAAACAAAGGTATTCCTCAGAGCTGGACAGATGGCCGAATTAGATGCACGAAGAGCTGAAGTCTTAGCCAAAGCAGCAAGACTCATACAGAGACAAATCCGTACACATTTAACAAGAAAAGAGTTTATCACCTTGAGAAATGCTACAATTCATATCCAGAAAATTTGGAGAGCAAAACTTGCACGTGAACTCTATGAATATATGAGGCGAGAAGCAGCCTCAATCAGGATACAGAAGCATGTGCGTGCACATAGAGCAAGAATGAATTACACATCATTACAAGGATGTTCTATAGTAATTCAATCTGGAATGAGAGCATTAGCCGCACGAAATGAATTTAGGTACCGAAGACAAACGAAGGCTTCAATCAAACTTCAGACACAATGGAGAAGAGTTCAAGCTCTTTCTGATTACAAACAACAAAAGAGAGCAGCTATTATATTTCAGTGTCTCTGGAGAGCCAGAGTAGCTAGAAGAGAGCTCAGAAAGCTTCGGATAGCTGCAAGGGATACTGGAGCACTTAAGGAAGCAAAGGACAAGTTGGAGAAGCGTGTTGAGGAGCTTACATGGAGATTAGACATCGAAAAACACATGAGGGTTGACCTTGAAGAAGCTAAAGGACAAGAGATTGCAAAACTACAAAACACTTTACAAGAAATACAAGGTCAGCTAGATGAAGCCCGCGCTGCAATTATTCATGAAAGAGAAGCAGCAAAACTAGCAATTGAGCAAGCACCACCAGTAATTAAAGAGGTTCCTGTTGTGGACAACACAAAGCTAGAGTTACTAACAAATAAAAATGAGGAGCTGGTGACTGAAGTAGAGGAGTTGAAGAAGAAGATTAAAGAATTTGAAGAAAAGTGCTCAGCAATTGAAAATGAGAATCAAGCTAGGATTAAAGAGGCAGAAGAAGCACAACTAAAAGCAACACAACTTCAAGAGACTATTGAAAGATTGGAAGTGAGCCTGTCCAACCTCGAAACTGAAAATCAAGTGCTATGCCAGCAGGCATTGGTAGAATCAAAAAATGAAGATCTTTCTGAAGAGATCAAAATCCTAAAGGATCAGATAGCAAACCTAGAATCAGAGAATGAACGCCTGCGGGACCAGGCAGAAACAGCTGCCATGGAGCAGAAAGTTCACCCAGATATAATAGCAACAAACCAGGAAATTTCTGCTGATCAACACGAACAACATATCCAACAAAGAATTGTAGCAGATAATGTGACTCCACAAATCAAGGTATACTTTAAATTTTCTTACAAAAACAAATCATTTTATGACATTATCTTTTATGAGGGTGCAGAATCTAGACAATGGACATCTAGCCGAGGAAGAATGCCTTATGATGCACTGCTCAAGTGCCTTACCGTAGATAAGCGTTTCGAGAACAACAGACCAGCAGTTGCTTGTATTGTTTATAAAGCACTTCTTCATTGGAGATCCTTTGAAGCAGAGAAGACACATATATTTGATAAAATTAGTCACACCATCCGATCATCTATAGAGAGTCAAGAAGGAATCAATGATCTAGCATATTGGCTTTCAACAACTTCAACACTTCTGTTCTATCTGCAATGCACACTCAAGGTCAGCAACACAACTAAGACGGTGTCGCGCAATCGAAACTCCCCTGCCACTCTATTTGGAAAAATGGCACAGGGTTTACGTTCATCTTCATTGGGAATTGGGATTTCAAGTGGTTATAGTGGAATGGTGGACAAGCACAATGACCAATCTAAAGTGGAAGCCAAGTACCCAGCAATTCTGTTTAAGCAACATTTGACTGCATATGTTGAGAAGATATATGGAATGATCCGTGACAGTTTAAAGAAGGAGATCAGCCCATTCTTGAATTTGTGTATTCAGGCACCAAGAGCCATAAGAACCAGATCAATAAGAGGGTCATCCAGAAACATCCATTCGAATATACTTGCAAAACAACAGGCACTGCACATGCACTGGAAAAGCATTGTCAACAAGCTAGATGAAATCTTGGGTGTACTGTCTGATAACTATGTCCCTTCCATGATAACAGGGAAGATATTTAGTCAGGTTTTCTCATTCATGAATGTCCAACTCTTTAATAGTTTGTTGCTTCGTCGAGAGTGCTGCTCCTTTAGCAATGGAGAATATTTGAAGGCAGGTTTGCATGAGTTGGAACTGTGGTGCCTTAAAGCAACAGATCAGTTTGCTGGGTCATCTTGGCATGAACTCAAACAAATACGCCAAGCTGTCGGATTTCTGGTCTTGCATCAAAAGGCTCACAAATCTTTGGAAGAGATCACCAATGAACTCTGCCCGGTGTTAAGTATTCCACAAATATATCGTATTGGAACTATGTTCTGGGATGACAAGTATGGATCTCAGGGATTATCTCCAGAAGTCATAAGTAGAATGAGAGTACTTATGACAGAAGACTCGACAAGCATGCCCAATAACTCATTCCTTCTTGAAGTGGACTCCAGCATACCATTCATGATGGAGGAGATGTTCAGGTCTATGAGTGACATCAGACTATCAGATATGGAAGTGGATCCACCACCAATCCTCAGGCAAAGGTCTGATTTCCAATTCTTGCTGCAACACATTGAAAGCGATTCTCAGTAA 4746 0.409 MGTPVNIIVGSHVWVEDPEISWIDGVVTEIHGKNATIVTSNGRTVVAEISSIYPKDTEAPAAGVDDMTKLAYLHEPGVLHNLAIRFSLNEIYTYTGNILIAVNPFRRLPHLYDIHMMEQYKGAAFGELSPHLFAVADTCYRAMINESRSQSILVSGESGAGKTETTKMLMRYLAFMGGRSGTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNGKISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCSAPPEDVKKYKLGNPKQFHYLNQSNCYEVSNVDDAKEYLETRNAMDIVGINQEEQDAIFRVVAAILHLGNIDFVKGTEVDSSKLKDEKSLFHLRTAAELFMCDEKALEDSLCKRVIVTPDGNITKPLDPDSASLSRDALSKTVYSKLFDWIVDKINSSIGQDSNAVSIIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKAHKRFSKPKLSRTNFTINHYAGDVTYQADYFLDKNKDYVVAEHQALLCASKCSFVANLFPPLPDETSKQSKFSSIGSQFKQQLQSLMETLNTTEPHYIRCVKPNTVLQPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFEEFLDRFGMLAPDVLDGSDEKKAAIAICDKMGLTGYQMGKTKVFLRAGQMAELDARRAEVLAKAARLIQRQIRTHLTRKEFITLRNATIHIQKIWRAKLARELYEYMRREAASIRIQKHVRAHRARMNYTSLQGCSIVIQSGMRALAARNEFRYRRQTKASIKLQTQWRRVQALSDYKQQKRAAIIFQCLWRARVARRELRKLRIAARDTGALKEAKDKLEKRVEELTWRLDIEKHMRVDLEEAKGQEIAKLQNTLQEIQGQLDEARAAIIHEREAAKLAIEQAPPVIKEVPVVDNTKLELLTNKNEELVTEVEELKKKIKEFEEKCSAIENENQARIKEAEEAQLKATQLQETIERLEVSLSNLETENQVLCQQALVESKNEDLSEEIKILKDQIANLESENERLRDQAETAAMEQKVHPDIIATNQEISADQHEQHIQQRIVADNVTPQIKVYFKFSYKNKSFYDIIFYEGAESRQWTSSRGRMPYDALLKCLTVDKRFENNRPAVACIVYKALLHWRSFEAEKTHIFDKISHTIRSSIESQEGINDLAYWLSTTSTLLFYLQCTLKVSNTTKTVSRNRNSPATLFGKMAQGLRSSSLGIGISSGYSGMVDKHNDQSKVEAKYPAILFKQHLTAYVEKIYGMIRDSLKKEISPFLNLCIQAPRAIRTRSIRGSSRNIHSNILAKQQALHMHWKSIVNKLDEILGVLSDNYVPSMITGKIFSQVFSFMNVQLFNSLLLRRECCSFSNGEYLKAGLHELELWCLKATDQFAGSSWHELKQIRQAVGFLVLHQKAHKSLEEITNELCPVLSIPQIYRIGTMFWDDKYGSQGLSPEVISRMRVLMTEDSTSMPNNSFLLEVDSSIPFMMEEMFRSMSDIRLSDMEVDPPPILRQRSDFQFLLQHIESDSQ 1581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02343 1581 Gene3D - 252 310 - -
Aip08g02343 1581 SMART DIL_2 1393 1500 IPR002710 -
Aip08g02343 1581 SMART MYSc_2a 56 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip08g02343 1581 Coils Coil 972 1089 - -
Aip08g02343 1581 Gene3D - 439 623 - -
Aip08g02343 1581 Pfam DIL domain 1394 1497 IPR002710 -
Aip08g02343 1581 Pfam Myosin N-terminal SH3-like domain 9 47 IPR004009 GO:0003774|GO:0005524|GO:0016459
Aip08g02343 1581 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 881 IPR027417 -
Aip08g02343 1581 ProSiteProfiles IQ motif profile. 734 761 IPR000048 GO:0005515
Aip08g02343 1581 CDD MYSc_Myo11 76 719 IPR036018 -
Aip08g02343 1581 ProSiteProfiles Dilute domain profile. 1204 1518 IPR002710 -
Aip08g02343 1581 Coils Coil 915 949 - -
Aip08g02343 1581 PANTHER MYOSIN 21 1571 - -
Aip08g02343 1581 ProSiteProfiles IQ motif profile. 805 834 IPR000048 GO:0005515
Aip08g02343 1581 Gene3D Kinesin motor domain 65 662 IPR036961 -
Aip08g02343 1581 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Aip08g02343 1581 CDD MyosinXI_CBD 1161 1541 IPR037975 GO:0007015
Aip08g02343 1581 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Aip08g02343 1581 Gene3D - 667 729 - -
Aip08g02343 1581 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip08g02343 1581 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip08g02343 1581 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip08g02343 1581 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip08g02343 1581 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip08g02343 1581 Pfam IQ calmodulin-binding motif 758 777 IPR000048 GO:0005515
Aip08g02343 1581 Pfam IQ calmodulin-binding motif 855 874 IPR000048 GO:0005515
Aip08g02343 1581 Pfam IQ calmodulin-binding motif 784 802 IPR000048 GO:0005515
Aip08g02343 1581 Pfam IQ calmodulin-binding motif 736 754 IPR000048 GO:0005515
Aip08g02343 1581 Gene3D - 784 831 - -
Aip08g02343 1581 Gene3D - 732 783 - -
Aip08g02343 1581 Gene3D - 832 880 - -
Aip08g02343 1581 ProSiteProfiles Myosin motor domain profile. 62 731 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip08g02343 1581 ProSiteProfiles IQ motif profile. 757 786 IPR000048 GO:0005515
Aip08g02343 1581 Coils Coil 883 910 - -
Aip08g02343 1581 PANTHER MYOSIN-12 21 1571 - -
Aip08g02343 1581 ProSiteProfiles IQ motif profile. 782 806 IPR000048 GO:0005515
Aip08g02343 1581 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 785 IPR027417 -
Aip08g02343 1581 Coils Coil 723 743 - -
Aip08g02343 1581 Pfam Myosin head (motor domain) 64 719 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip08g02343 1581 ProSiteProfiles IQ motif profile. 853 882 IPR000048 GO:0005515
Aip08g02343 1581 SMART iq_5 804 826 IPR000048 GO:0005515
Aip08g02343 1581 SMART iq_5 733 755 IPR000048 GO:0005515
Aip08g02343 1581 SMART iq_5 829 851 IPR000048 GO:0005515
Aip08g02343 1581 SMART iq_5 756 778 IPR000048 GO:0005515
Aip08g02343 1581 SMART iq_5 852 874 IPR000048 GO:0005515
Aip08g02343 1581 SMART iq_5 781 803 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02343 Aip-Chr8 100277666 100289406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02343 116 1576 Myosins gene family AT2G31900 71.565 0.0 2174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02343 K10357 - gmx:100817933 2718.34