Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02328 ATGAATTCTTTCAACTCTTGTGCTTGTTACAGAACAATAGATAGTTTAGGTGTTGCTTATGGGAAAGGAAAACTAACATGCTTCCTTGGAAACATCAATGGAGTTGTGGATGTGgatccAACAACTATTGTAGAGGAAGAGAAATTGGAAACCGCGTTGTTCTCCAACAAATCCTCTCCCACCGCACCTCCAAAATGTCCTAATCGAATATATGATCACGGACCCCTTGCTGTAAAGCCTCAACGTCTCTCTCTATCGCCGCCAATGTCTCCATCTAGTTCTCTGACCTCTTTCACGGCCGATTTTGGTGTGGAACTCAAGCTTTCTGGTCATCGGGGATCGGTGAATGTATGCTTCAGCTTCGTCCCGCACCAATCAGACCATCTGTCATTGTCTTTTTCGCGTCACTATCTGAGTCTAGTGCACTGCCTCCGGTGTCGCACAAGGTGGTCGTCGTTGTTTGTCTCGTCACTGTGTTGCAGTCAGCATGATCGTTCGCTGCGCTCAAGGCCGCCGGCGACAGAAGCAGCAGGTCCCGAGGTTGTTGTTGTCGTCGTCGCTCTTTGTGTGTCATCGTCAAGCACTCAGTCGCGTGCCTTCCGTTTGCTCATGCTCACTGAAAGCAGCACGACCCTGAGACGGACGTCAATGTCATCTGCTTGCGTGGAGCCCCGCCAACAGCAGCCAGTCCCCGATGTGGGTATGAGCTCCTTCAGAGACGCTGCAACAGGGGTAGCTAATGGTGAGGCAACGGTGGAAGATAAATGCGACGTGAAAAAAAGGACATTGGAATGGTCAAATGAAGAATTAGAAGATTATATTGAGGAAGTCATGGGGTTGACTAGTTTTGAGGAGGATGCATCTGATTACGAAGATGTTGCTAAATTAGGTGCAGAAGAAATATGTAAGAAAATCTTTCACACTGAGCAACGTGCATACGAGTTCTATACTAAATTTGGCAAATGGCATGGATTTGGTGTCCGCAAGGGAGATTATGGAAAGGATGAAGAGGGTATGATAACTAAGAGAAGGTTCTTTTGTAACAGGATAGGACTAAGAGATGAAACTACACAGAGGAAGGTGAGAAAAGTTATTTCGGAGCATAATCATGACTTGACCTCGAAGGGTATGGTTCATATGATACCTCAATTTCGAGGGATTAGTGAGGTAGCAAAGGATCATATAGATGGTATGCAAAGTTACGGGTTACAGACATCTAAAATTCTGGGCTACATGGCGGGGATTGCTAGAGTGTATTCACTTCTGGGATTCACAAAGAAAGATGCATACAACTATATCGATAAGACAAACAGAGTAGACTATCAGTACTTTGGAGATGTCCTCGCATTTGACTCAACGTATAAGAAGAATAAGTACAAGCGACAACTGGTTATATTCTCTGGCTCCAGCAACCATAAACAAACAATGATATTTGGGTTTGGTTTAGTGCTTGACGAGAGCATCCCTTTGTACACGTGGCTTCTCCAGAACTTGCTGGAGGTGATGTGCCACAAGTCCCCATCCGTTGTTGTTACCGATGGAGATGATGCAATGATTGCAACGATTAGGAAAATATTTCCGAACGCAACCCATCGATTGTGTGCGTGGCACTTGCAGAAGAATGTTACTTCAAATGCAAAAGAGAAAATGTTTCGTGATTTGTTCTCGAAGTGGCTGTATGGCGACATGGAGGTTGCAGACTTCGAGGATGAATGGGCGGAAGCAGTTCAGGTGTATGGATTGGGGGACAAGCTGTGGCTGATGCAGATATACAAGAAAAGGAAAATATGGGTAAACGCATACTTGAAAAAAAAATTTGTGCCGGATATCGAACCACGTCTAGATGCGAGGGGATAA 1857 0.4502 MNSFNSCACYRTIDSLGVAYGKGKLTCFLGNINGVVDVDPTTIVEEEKLETALFSNKSSPTAPPKCPNRIYDHGPLAVKPQRLSLSPPMSPSSSLTSFTADFGVELKLSGHRGSVNVCFSFVPHQSDHLSLSFSRHYLSLVHCLRCRTRWSSLFVSSLCCSQHDRSLRSRPPATEAAGPEVVVVVVALCVSSSSTQSRAFRLLMLTESSTTLRRTSMSSACVEPRQQQPVPDVGMSSFRDAATGVANGEATVEDKCDVKKRTLEWSNEELEDYIEEVMGLTSFEEDASDYEDVAKLGAEEICKKIFHTEQRAYEFYTKFGKWHGFGVRKGDYGKDEEGMITKRRFFCNRIGLRDETTQRKVRKVISEHNHDLTSKGMVHMIPQFRGISEVAKDHIDGMQSYGLQTSKILGYMAGIARVYSLLGFTKKDAYNYIDKTNRVDYQYFGDVLAFDSTYKKNKYKRQLVIFSGSSNHKQTMIFGFGLVLDESIPLYTWLLQNLLEVMCHKSPSVVVTDGDDAMIATIRKIFPNATHRLCAWHLQKNVTSNAKEKMFRDLFSKWLYGDMEVADFEDEWAEAVQVYGLGDKLWLMQIYKKRKIWVNAYLKKKFVPDIEPRLDARG 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02328 618 Pfam MULE transposase domain 447 541 IPR018289 -
Aip08g02328 618 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 434 606 IPR031052 GO:0006355
Aip08g02328 618 PANTHER OS02G0262500 PROTEIN 434 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02328 Aip-Chr8 99213745 99218806 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02328 11 80 Acyl Lipid Metabolism Gene Families AT4G33790 36.145 1.55e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g02328 MULE 1.3e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02328 - - ahf:112701370 440.654