Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02316 ATGTGCAGCTTCGAGGGCTACCAAGACACACTCTACGCCCATTCCATGCGTCAATTCTACAGCGACGGCCACATTTATGGCACCATTGATTTTATTTTCGGTAACGCCGCCGTAGTCTTCCAAAATTGCAACATCTTCTCCCGCCTCCCTATGACTGGCCAATTCAACTCAATTACCGCACAAGGCAGAACCGATCCCAACCAAAATACCGGAATCTCCATACACAACGCAAAGATTCGACCCGCTGACGATTTGGCCCCTCGCGTTGGTGTTGTGAAAACAAGGGAAAAAAGCGTAACTGCATTCTCTTGCAAAGGGAACAACAACAAGAACAAGAGCAACAAAGCAAGAAAGGAAGGCATAATAATAATGGAAGCGAAAGGTGAAGTGAGAAGGCTTCACATAATTTACTTTCTTAGTAACATAGGTGGTCGTGCAGATCATCCTCATCTCATTCGTGTTCTTCATCTTGCTCGTAATGGTGTTTATCTCAGAGATGTTAAGAGGTGGCTTGGGGAATTGAGAGGAAAAGACTTGCCAGAAGCATTTTCTTGGTCCTACAAGAGGAGGTACAAAAGCGGGTATGTGTGGCAGGACTTGTTGGATGACGACCTCATAACTCCCATTTCTGACAATGAATACGTCCTCAAAGGATCACAAATCCATCCAACCCCATTTGAAAATTTTTCCCCTGATGGAAAGATAAAAAATGGTCATGTACTTGCGGAGATAAAATCTCCGCAAGTACATGTTACAGAGGGAAAACAGCAGCCATCTCTAATAGAAGAAGAATCTAGAATTATTGGACGAGACACGGAGTCCAAAATGAATACTCCTTTGAAAGTATCGGAGATCAGTCAGGACTCCTTGGTGTTTAGCTCCGAGAGGTCATCCGTGACGACGGACGGATACGAATCTTGCAAGGCAGAAGAAGAGAAGGAAAAGCCTTTGGTGAGAAGCAACAAAGAATGCAGCATTGAGAAAGAACACGAGAAACCGGAGAATTGTGTATTGCCTTCTTTGTACCACAAACTTCTGAGTAAGAGTATTGGTAACAAAGAAGAACAGAACAAAACTGATACACCTGATTCTTCTTTTTCTACCTCCTCCTCTTCGTCGTCGCAATCCTCCTTTAGCAAGCTTAGGAATAGTTCGAACCGAGTTTCGATGGCATTCCGGAACTGGATTTCTTGTGGGACAGTGGATACAAATGATGCAGCTCTAATAAGGATGGAAGATGCTAAGAAAATTGATTCAAATGAGTCTATGACTAACTTACCAGAAAATAAAGCACAGATTTGTAAAGGAGACAAATTTGGAGGATCAGCCAGGTGTTTTAGAACTTCTTGGAATAATGATCAACAAGAAAACCAACATGGGGCCAGAAAAAGTTTTGATGGAGAGGAAACAAACAGAAGCAGGAGAAAGCTGGGTGACTTCTTAAATCAAACTCATCACAAACCACTTGGTGAACCAATTTGCTCGCTATGTGGGAAGCCGTTCAAACCAGAGAAAATGTACAAACACATGAAGTCTTGTAAAGGAATCAAAGCATTGGGAACATCCACTGCAACAGCAGCACTTGCTGACAAGACACAGCTTCATAGATCATCAACTTCCAATCATACAAATTACCTTTTGACTAATTAG 1650 0.4255 MCSFEGYQDTLYAHSMRQFYSDGHIYGTIDFIFGNAAVVFQNCNIFSRLPMTGQFNSITAQGRTDPNQNTGISIHNAKIRPADDLAPRVGVVKTREKSVTAFSCKGNNNKNKSNKARKEGIIIMEAKGEVRRLHIIYFLSNIGGRADHPHLIRVLHLARNGVYLRDVKRWLGELRGKDLPEAFSWSYKRRYKSGYVWQDLLDDDLITPISDNEYVLKGSQIHPTPFENFSPDGKIKNGHVLAEIKSPQVHVTEGKQQPSLIEEESRIIGRDTESKMNTPLKVSEISQDSLVFSSERSSVTTDGYESCKAEEEKEKPLVRSNKECSIEKEHEKPENCVLPSLYHKLLSKSIGNKEEQNKTDTPDSSFSTSSSSSSQSSFSKLRNSSNRVSMAFRNWISCGTVDTNDAALIRMEDAKKIDSNESMTNLPENKAQICKGDKFGGSARCFRTSWNNDQQENQHGARKSFDGEETNRSRRKLGDFLNQTHHKPLGEPICSLCGKPFKPEKMYKHMKSCKGIKALGTSTATAALADKTQLHRSSTSNHTNYLLTN 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02316 549 Pfam Pectinesterase 2 93 IPR000070 GO:0030599|GO:0042545
Aip08g02316 549 MobiDBLite consensus disorder prediction 361 383 - -
Aip08g02316 549 Pfam Protein SOSEKI, plant 134 379 IPR010369 -
Aip08g02316 549 Gene3D - 1 103 IPR012334 -
Aip08g02316 549 MobiDBLite consensus disorder prediction 450 472 - -
Aip08g02316 549 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 126 542 IPR010369 -
Aip08g02316 549 MobiDBLite consensus disorder prediction 292 330 - -
Aip08g02316 549 MobiDBLite consensus disorder prediction 350 383 - -
Aip08g02316 549 PANTHER F3F20.2 PROTEIN 126 542 - -
Aip08g02316 549 MobiDBLite consensus disorder prediction 305 330 - -
Aip08g02316 549 SUPERFAMILY Pectin lyase-like 2 92 IPR011050 -
Aip08g02316 549 ProSitePatterns Pectinesterase signature 2. 25 34 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02316 Aip-Chr8 98959331 98966098 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02316 2 102 Carbohydrate Esterase AT4G02330 67.290 8.86e-41 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02316 - - ahf:112770241 888.256