Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02310 ATGATTCTTCAAGATTGTAAGGGTGGTAGGATCTATGCCACTATTCCGAGGGCGCTAGCCAAGAAATGGAGTGGTAACATCATAGAGTTTGAGATGTACACAATGACAAACTTCATAGTATTTGACAATAAGACCATCTTGAAGAATGGTGTTAGTAGGATGGTACTAACATTCTCTCATAGAACAATGGTTAATCATGTGGATAACCCAAGCTTTCCTCTAGAAGCATTTAGGTTGAGGTCTTTTAGTGATCTTCTAACAGTAGATAGATTGGAACATTCTGAGATGTTTGATTTTATTGGTAAGGTGGTCGGTAAGGAAGACCCGCGAGACTTGATCACTAGAAGGGGTTTAATGACTAAGCGTATGGTTGTTATTTTGGAAGATCTTGAGAATAACAAAATGAGTTGCACATTGTTTGGTCAGTTGGTGAACCACATTCTTCCATATCTTGATTATGGGAGAGTTGAGCCACTTATTGTGGTCCTTCAATATTTCAAAGCAACAAGGTGGAGTGGTAAAACTTCGGTTCAGAGCAATTTTGATATCTCCAAAGTTCACATAAACCCAACACTAAAAGAAATTGATAGTTTTAGATGCAGTGGTGGTCCATCGAGCTCAGCTAGGATTAGCCAGGTGTCCTCTCTGGCTGCGTGGTCTGCAAATGATGAGTTTAACCGTGGATCTGTCAGTGTAAAGACTATCGAGGATGCACTAAACTCTGTTGAGGAAGGTCCCATATGGATTGCTGGGGAAATTGTTTCAATAAATGCAGGAAAAAACGATTGGTTTTATAAAGCATGTAGGAGGTGTCCCAAGAAGGTTGAAACCCCTATTGGTGATCGGTATGAATGTGGGAAGTGTGGCCACACACATGGAGCAGCCGCAATAAGGTACAAGGTTGAAGTAATGGTTCATGATGGATTAGTTGGAGATGATGATTATCCACCATCTCTTAATAACATGATGGATAAGAAGGTGCTTTTCAAGATTAATGTTAAATCTGCCAATATAAAGCAATATGATCCAGTTTACACCGTGATGAAAGTTTGTGAGGATGAGGATATTATCCTCAAGAACCTCCCAAAAAATATGCCCTCTAATCAATCTACTCATGTCCATGGTTTGAATTCCCATAGGTGGCCGACTGCAGCATCTCTCTTCACTCACGCAACACAACACACACAAACACAATGCACCCACACACATAGAGAAGGAGAGAGCATGAGAGAGAGCAGAAGAGGAGGGAAGAGAGAGGAAGGCATCGCTCCCCAGCCATCATCCAGCTCGTCGCCGTTGCCATGTCACTGA 1311 0.4172 MILQDCKGGRIYATIPRALAKKWSGNIIEFEMYTMTNFIVFDNKTILKNGVSRMVLTFSHRTMVNHVDNPSFPLEAFRLRSFSDLLTVDRLEHSEMFDFIGKVVGKEDPRDLITRRGLMTKRMVVILEDLENNKMSCTLFGQLVNHILPYLDYGRVEPLIVVLQYFKATRWSGKTSVQSNFDISKVHINPTLKEIDSFRCSGGPSSSARISQVSSLAAWSANDEFNRGSVSVKTIEDALNSVEEGPIWIAGEIVSINAGKNDWFYKACRRCPKKVETPIGDRYECGKCGHTHGAAAIRYKVEVMVHDGLVGDDDYPPSLNNMMDKKVLFKINVKSANIKQYDPVYTVMKVCEDEDIILKNLPKNMPSNQSTHVHGLNSHRWPTAASLFTHATQHTQTQCTHTHREGESMRESRRGGKREEGIAPQPSSSSSPLPCH 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02310 436 Gene3D - 1 69 IPR012340 -
Aip08g02310 436 SUPERFAMILY Nucleic acid-binding proteins 232 352 IPR012340 -
Aip08g02310 436 Gene3D - 219 309 IPR012340 -
Aip08g02310 436 MobiDBLite consensus disorder prediction 392 436 - -
Aip08g02310 436 Gene3D - 71 203 IPR012340 -
Aip08g02310 436 PANTHER REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A-LIKE 27 362 - -
Aip08g02310 436 CDD RPA1_DBD_B_like 98 199 - -
Aip08g02310 436 PANTHER REPLICATION FACTOR A 1, RFA1 27 362 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Aip08g02310 436 MobiDBLite consensus disorder prediction 400 420 - -
Aip08g02310 436 SUPERFAMILY Nucleic acid-binding proteins 79 199 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02310 Aip-Chr8 98756973 98759147 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02310 68 307 Core DNA Replication Machinery Family AT2G06510 23.256 4.04e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02310 - - aip:107640863 531.946