Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02298 ATGCTAGCTGACTTTGGCCTTGCCAAATGGAGGAACGGTGACGGTACTATGCACACCAGGATAATGGGCACAATAGGATACCTATCTCCAGAGTATGCTGAAACCGGTGTAGTTTCTGAGCGAACAGATGTGTATGCATTTGGCATCGTTTTGTTACAACTGATTTCAGGACACAAGGTCTCCAATTTCCGCAATCCAGAACAACAATCTCTCAGACAATGGGCTATGCCAATCATTGAGTCGTTGGCTTTACACGAACTGATTGACACTCGTCTTGGGAATTCATATGACACGTATCAACTATACCTCATGGCCAAAACCGCATTCTTCTGCGTCCAAATAGAGCCTGATGAGCGTCCTTCAATGGGAGAGGTTGTGCGACTTCTTGAGGGAGAAAGTAAAAACTTCCACACAATAGGAGAGGAATTAGCATTTGGGATCAATGGTCCATTGCTCAACAAGCTTTTCGAGAGGCATTGCTTTCTTAACCTCCATGATCTCTTTGAACACCCCCTTAGAACCGTCCACGGAATTACTATGGCGGTGTCTCGACCTATCTCTTCTGGCGCTGGCGCTATCGCTACCACCATGACTCTTCTCTTTCTCGTTGTTTCCACTTATTGTGATGTTGCCATAATGACTCCAATTCGATCTGTTTTTGCCGTGAACCAAACCGTCCCAAGCCCTTTCTCCACTGTTGAGCTTCTCGATGACAATGGAGGTAGAGAAAATTTTGTCGTCGACTTCTCTtga 753 0.4555 MLADFGLAKWRNGDGTMHTRIMGTIGYLSPEYAETGVVSERTDVYAFGIVLLQLISGHKVSNFRNPEQQSLRQWAMPIIESLALHELIDTRLGNSYDTYQLYLMAKTAFFCVQIEPDERPSMGEVVRLLEGESKNFHTIGEELAFGINGPLLNKLFERHCFLNLHDLFEHPLRTVHGITMAVSRPISSGAGAIATTMTLLFLVVSTYCDVAIMTPIRSVFAVNQTVPSPFSTVELLDDNGGRENFVVDFS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02298 250 Gene3D Transferase(Phosphotransferase) domain 1 1 143 - -
Aip08g02298 250 SUPERFAMILY Protein kinase-like (PK-like) 2 130 IPR011009 -
Aip08g02298 250 Pfam Protein kinase domain 2 126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g02298 250 ProSiteProfiles Protein kinase domain profile. 1 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g02298 250 PANTHER OS01G0253100 PROTEIN 1 141 IPR045271 GO:0004714|GO:0006468
Aip08g02298 250 PANTHER RECEPTOR-LIKE KINASE 1 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02298 Aip-Chr8 98068545 98073708 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02298 2 133 Receptor kinase-like Gene Family AT1G07650 44.444 5.95e-29 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Aip08g02298 Pkinase 5.2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02298 - - aip:107611289 289.271