Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02297 ATGGAGAACCCTCATTCTTCTTCTTTTTCTTCTTCTTCTTGCTATGCTACTTCTTCTCCTTATGTGGTGATTGCATGCGACGCCACTAAGGACCGCAGCGAGAATGAGATTAAGCTAATCCTTGATAACATAAGAAAAAAGGGCGATCTTCTCTCTGCTGGTGACAGGTTGCTTGTGTTCTGTGTATTGCATAGGGTGCTTAACCCCATGGGGTACCAGACCATAGCATGCCCCGAGTCTATGTTTGGTACAAACTTTCGAGCAATGGAGGAACAAGTTAAAAAGAAAGCCGATGCATATGCAATTGAGCTTTTATCAAGTCATGAAGAATTTAAAAGTGTAGGGGTTAGCGTTGAAGTTAAAGTCACTGCAGGTTTTCCTCTTAGACAGGTTATTTTACAGGAGGTTACAAGATACAATGTATCATGGATTATACTTGATAGGCACCTTCGGCGCGACATGAGATTCTACCTGAACAGGATACCATTCAGGGTTGGATTGGTTAAAGATGACTTCTCTGTGGATATCTGGAGATCCCATCATGCAAACATTACAACAATCACCGAAACAAAGCCTGTCTATTCCTTTTACAAGTTTGTCTCTTTAGCAGATTGCCAAAGTATTGAAGACATTGAACAACAATCTATTATCTCTTTCAAAAGTTATCCCTATATGTTAACTTCTTCAGATACCTCTGCCATGATTAAGAGCTATACAAAGCATTCAAACGCTGACGTATGGGAGCAGAGTTCTTCACTAGAATCTGGACCTTCTAAGCATGAAAGATCAGGCGTAAGCATGAAAGGAGAACATAAGCATACCGATAACTCTCATGTTGGCCAAAAGCAAGGAGGCTCTACACCACCACTTCTTTGTTCTGGATGCAAGATAAGGACCGAATTGTCTGTCAATGAGTTGACGAGGTTTACCTATTCTGAAATACAGCAAGCAACAAATGATTTTTCAAAGGATAACCTAATAGGTGAAGGTGGATATGGTCATGTTTACAAGGGTGTTCTTAAAGATGGACAGCAAATTGCAGCAAAGGTAAGGAAAGAGGAAAGCTCACAAGGCTTTTCGGAGTTTCATTCCGAGGTCTATGTCTTAAGCTTCGCTCGCCACAAGAATATAGTTATGCTATTGGGTTTTTATTGCAAAGAAAACCGAAATATTCTTATATACGAGTATATCTGCAATAGGTCTCTTGGTTGGCATTTATTTGGTAAGTGTTTATAG 1236 0.4005 MENPHSSSFSSSSCYATSSPYVVIACDATKDRSENEIKLILDNIRKKGDLLSAGDRLLVFCVLHRVLNPMGYQTIACPESMFGTNFRAMEEQVKKKADAYAIELLSSHEEFKSVGVSVEVKVTAGFPLRQVILQEVTRYNVSWIILDRHLRRDMRFYLNRIPFRVGLVKDDFSVDIWRSHHANITTITETKPVYSFYKFVSLADCQSIEDIEQQSIISFKSYPYMLTSSDTSAMIKSYTKHSNADVWEQSSSLESGPSKHERSGVSMKGEHKHTDNSHVGQKQGGSTPPLLCSGCKIRTELSVNELTRFTYSEIQQATNDFSKDNLIGEGGYGHVYKGVLKDGQQIAAKVRKEESSQGFSEFHSEVYVLSFARHKNIVMLLGFYCKENRNILIYEYICNRSLGWHLFGKCL 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02297 411 CDD USP_Like 50 158 - -
Aip08g02297 411 MobiDBLite consensus disorder prediction 249 286 - -
Aip08g02297 411 Gene3D Phosphorylase Kinase; domain 1 293 396 - -
Aip08g02297 411 ProSiteProfiles Protein kinase domain profile. 321 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g02297 411 PANTHER OS01G0253100 PROTEIN 20 408 IPR045271 GO:0004714|GO:0006468
Aip08g02297 411 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524
Aip08g02297 411 MobiDBLite consensus disorder prediction 261 278 - -
Aip08g02297 411 PANTHER RECEPTOR-LIKE KINASE 20 408 - -
Aip08g02297 411 Pfam Protein kinase domain 322 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g02297 411 SUPERFAMILY Protein kinase-like (PK-like) 296 410 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02297 Aip-Chr8 98063937 98066975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02297 307 411 Trihelix Transcription Factor Family AT1G23540 43.810 6.19e-24 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Aip08g02297 Pkinase 5.7e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02297 - - vun:114163670 532.717