Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02276 ATGATAACACCAAGAAGGCAGGCTTTACTCACTAGTGCCCCCCAGTCCCCAACCTTCGTTCTCACCGTCGAAGAAGCCCGAGAACCATTAGAATGGGCTGCACGGCAAAAAATTGCCATTGGAGCTGCTCGTGGGTTACGAAATCTTCATGAAGAGTGTAGATTGGGATGCATTATCCACCATGACATGCGGCCTAACAACATTCTCATAACTCATGATTTTGAACCACTGGTTGGTGATTTTGGATTGACGAGGTGGCAACCTGATGGAGACACGAGTATGGAAACCCGAGTAATTGGAACATTCGGGTATTTGGCTCCTGAATATGCTCATAGCGGCCAAATAACTGAGAAAGCTGATGTTTATTCATTTGGGGTGGCACGACCTCTGTTGGAAGAATATGCCATTGAGGAACTGATTGATCCAAGGCTGGGGAACCAATACTTAGAAAATGAGGTATATTGCATGTTGCATGCTGCATCATTATGCATACGGCGAGATCCTCATTCTAGACCACGCATGTCACAGGTTCTTCATATACTGGACGGCGACATGGTCATGGACACAAGTTACATTTCAACTCCAAGTTATGATGTGGGAAACCGGAGTGGCCGACTCTGGTCGGAGCCGCTGCAGAGGCAGCACCATTACAGGGGTCCTCTGTTAGAGGAGTCACTTGAATCATTCAGTGGGAAGCTATCTCTTGACAAATAG 714 0.4706 MITPRRQALLTSAPQSPTFVLTVEEAREPLEWAARQKIAIGAARGLRNLHEECRLGCIIHHDMRPNNILITHDFEPLVGDFGLTRWQPDGDTSMETRVIGTFGYLAPEYAHSGQITEKADVYSFGVARPLLEEYAIEELIDPRLGNQYLENEVYCMLHAASLCIRRDPHSRPRMSQVLHILDGDMVMDTSYISTPSYDVGNRSGRLWSEPLQRQHHYRGPLLEESLESFSGKLSLDK 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02276 237 PANTHER INACTIVE PROTEIN KINASE SELMODRAFT_444075 27 126 - -
Aip08g02276 237 Gene3D Transferase(Phosphotransferase) domain 1 18 193 - -
Aip08g02276 237 Pfam Protein kinase domain 30 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g02276 237 ProSitePatterns Tyrosine protein kinases specific active-site signature. 58 70 IPR008266 GO:0004672|GO:0006468
Aip08g02276 237 ProSiteProfiles Protein kinase domain profile. 1 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g02276 237 PANTHER INACTIVE PROTEIN KINASE SELMODRAFT_444075 127 235 - -
Aip08g02276 237 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 27 126 - -
Aip08g02276 237 SUPERFAMILY Protein kinase-like (PK-like) 25 192 IPR011009 -
Aip08g02276 237 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 127 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02276 Aip-Chr8 96869553 96871840 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02276 25 200 Trihelix Transcription Factor Family AT1G70460 42.453 1.74e-43 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Aip08g02276 Pkinase 5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02276 - - ahf:112783851 399.823