Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02267 ATGTGGAGATTTAACCCATTTACACACAAGGAGGCAGCTGGCCTTGAAGGCCGAGTTATAGATGTCGGCAATCTTAAGATAAATGTCCAGAAGGCCATCGCAGAAGGAGGGTTCTCTTGTGTTTACTTAGCACGTGATGCTTTCCATATGTCAAAGCAATATGCGTTGAAGCACATCATATGCAATGATGATGAATCACTTGCATTGGCAAAGAAGGAGATATCTGTGATGAAGTCACTGGTAGGACATCCCAATGTAGTCACACTTCATGCTCATACAATATTTGATATGGGTAGGACAAAAGAGGCATTTCTTGTAATGGAATATTGCGAGAAGTCTCTTGTTAGTGTGCTGGAAAGCCGAGGAGCAGGTTATTTTGATGAGAACCAGGTTCTCTTAATCTTCAGGGATGTATGTAATGCAGTTTTTGCTATGCACTGCCAGTTCCCACCTATTGCTCACCGAGACTTGAAAGCAGAGAATCTTTTATTAGGTTCAGATGGTTTATGGAAGTTGTGTGACTTTGGAAGCACTTCCACCAATCACAAGCGTTTTGAGAAGCCAGAAGAAATGGGAATCGAGGAAGACAATATCAGGAAGTACACAACCCCTGCCTACAGGGCCCCTGAGATGTGGGATCTGTTCCTTAGAGAAGTCATCAACGAGAAAGTGGACATATGGGCACTAGGGTGTCTCCTTTTTCGCATATGCTATTTCAAAAGTGCTTTTGACGGGGAATCAAAGCTCCAAGTCTTAAATGGAAACTACCGCATTCCTGATTTGCCTAGATACAGTTCATCAGTCACGGATTTAATCAGAGACATGCTTCAAGCTAGACCAGATGACAGACCAGATATCACGCAGGTCTGGTTTCGTGTTAATGAGCAGCTACCTATTACTTTACAGAAGTCATTGCCTGACAGGCCACCTGAGTTGCCTGCTTCCAACCATCCGGAAGGTTCTTCAATGTCCACTAACAAATCACACCCAGCACCTAGCAGGAATCCACCTCCCCCGCCTTCATCTGTAGAATCCAAACCATCGGTCCAGGCATCTGTTGCTTCTAGGGGTGGTGGAAATGGGGGGCAGCTTGGTGCTTTCTGGTCCACTCAGCATGCAAATGATTCAATCGTTTCCAAGGAAAAGAGTAAACCTGTATTTGATGAAGAACCATCTAGTAACAATAACACATTAAAGGATGATAGAGTTCATCCAGAGAATGATCAGTTACCCAAAAATGTTGGTACTAACAAAGTGGCCAACGCACCAACTCATTCAGTAAAAAGCAGTGTACATGGAAAGTCACACAAGCCTGACACTGCATCATCCAAGGATTTCGAATTGAACTTTTTTAAGGATAAAGGTCAGATGAATGAGAGGGGATTGTCAAATATAGACAATACAGCTACGTTTCAGGATCATGCTTTTAACACTTTTGTTGCAGAATTTGATACTGCTAAGCTCAGTCCTGGACTTAAGTCTGAAAGGGAAGAAACATTAGAAGCTGAGGTGGAGAAACTGAAAGGGCAGTTGAAGGAAGCAAACATAGCCAAAGCTGAAATCACTTCAAAGTATGAAAAGCTTTCTGCTATATGCAGATCGCAAAGGCAAGAATTACAGGATCTAAAACAGGCACTTGCAGCAAAAACTCCCTCACCAAATAGGGAGGGTATGAGGACCTCTCCTGCACTTACATCATCTGCATCCACGGCTTTTCCTGAGGAACCACGACAACAAACCTCCTTTTCAGCTGACAATACTTCAAAATCTGTCAGGACTAGAAATACCCAGCAGAAGCCGCAGCCTGCTCCAGTTGCTGCTAACTTCGATTCGTGGGGTTTTGGATCTGATAACTTCAGTGCTGTAAGAGCTAGTACCCCACAGATGCCAAGACCTGGTGAAGGGAGTAATTCTCAGGCATTTGGTGAAGCAAAGGCATTTGAGAAGAAATCAACTACCCCCCCTGCTGGATGGGCTGGATTTTAA 1986 0.4386 MWRFNPFTHKEAAGLEGRVIDVGNLKINVQKAIAEGGFSCVYLARDAFHMSKQYALKHIICNDDESLALAKKEISVMKSLVGHPNVVTLHAHTIFDMGRTKEAFLVMEYCEKSLVSVLESRGAGYFDENQVLLIFRDVCNAVFAMHCQFPPIAHRDLKAENLLLGSDGLWKLCDFGSTSTNHKRFEKPEEMGIEEDNIRKYTTPAYRAPEMWDLFLREVINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPRYSSSVTDLIRDMLQARPDDRPDITQVWFRVNEQLPITLQKSLPDRPPELPASNHPEGSSMSTNKSHPAPSRNPPPPPSSVESKPSVQASVASRGGGNGGQLGAFWSTQHANDSIVSKEKSKPVFDEEPSSNNNTLKDDRVHPENDQLPKNVGTNKVANAPTHSVKSSVHGKSHKPDTASSKDFELNFFKDKGQMNERGLSNIDNTATFQDHAFNTFVAEFDTAKLSPGLKSEREETLEAEVEKLKGQLKEANIAKAEITSKYEKLSAICRSQRQELQDLKQALAAKTPSPNREGMRTSPALTSSASTAFPEEPRQQTSFSADNTSKSVRTRNTQQKPQPAPVAANFDSWGFGSDNFSAVRASTPQMPRPGEGSNSQAFGEAKAFEKKSTTPPAGWAGF 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02267 661 CDD STKc_GAK_like 26 298 - -
Aip08g02267 661 Pfam Protein kinase domain 29 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g02267 661 MobiDBLite consensus disorder prediction 410 429 - -
Aip08g02267 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Aip08g02267 661 PANTHER SERINE/THREONINE PROTEIN KINASE 1 561 - -
Aip08g02267 661 PANTHER NUMB-ASSOCIATED KINASE, ISOFORM A 1 561 - -
Aip08g02267 661 MobiDBLite consensus disorder prediction 613 635 - -
Aip08g02267 661 MobiDBLite consensus disorder prediction 377 408 - -
Aip08g02267 661 MobiDBLite consensus disorder prediction 301 442 - -
Aip08g02267 661 MobiDBLite consensus disorder prediction 546 661 - -
Aip08g02267 661 SMART serkin_6 27 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g02267 661 ProSiteProfiles Protein kinase domain profile. 27 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g02267 661 MobiDBLite consensus disorder prediction 554 604 - -
Aip08g02267 661 Coils Coil 497 545 - -
Aip08g02267 661 SUPERFAMILY Protein kinase-like (PK-like) 29 340 IPR011009 -
Aip08g02267 661 Gene3D Transferase(Phosphotransferase) domain 1 10 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02267 Aip-Chr8 95570394 95573886 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02267 26 292 CBL-interacting serine-threonine protein kinases AT5G45810 30.282 1.55e-20 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Aip08g02267 Pkinase 4.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02267 K08853 - gmx:100808507 1009.98