Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02252 ATGGAAAACCATCAAAACAATAACCCGACCCGTGACCCAGACCTAGCAGAAGAAGAGAAGAAGAAGCGACACCAACACCCTCAGGTTTGGGGCACGTGGGAGGAACTCTTGCTAGCGAGCGCCGTCAACCGCCATGGCTTCAAAGACTGGGACACCGTCGCCATGGAGGTACAGTCGCGGACCTCCGTACCCAACCTACAAGCCACCGCGCTCCACTGCGAGCAGAAATTCCACGATCTCAACCTCCGATTCGCCGACCAATTAAACGACGCCGTGCCGCCGCTTCTCCAGAACGGCGCGGCCGCCGTCGATAGCTCTGATCATGTCCCCTGGCTCGACGAATTGCGAAAGCTCCGCGTCGCCGAGCTCCGCCGCGAGGTCCAACGCTCCGACGTTTCTATCCTGTCGTTGCAGTTGAAGGTGAAGAAGTTGGAGGAGGAGAGAGAGAAAGAAAATGACGGTAAAGTCGATGAGAAAGCAGATCTGGCGGTTTGCGGCGAGGCACGGCCCGGAAACGATGGAACCGGCGGAGAAAGGGAAGTTCCGGAGCCGACCGGTTCTGAACCGGAGATTCGCCGGCTCGACGAGAGCACCACGAACACTGATAAGCTTTTGCCAACCACCGGTGACGAGTCGGACCGGGAAAATCAGTCGGTTAATGAGTCGAACTCGACCGGTTCGCGGTTTGAGGGAGGGAAAACCGGAGCAGGAGATGGTGATGGGAAGACGGGGGTAGGGGCGGTTCCGGTTCATCCCGGTCCGAAAGAACCGGATCCGGTTGGCAGGAAGCGGAGACCGATTGGGGAGGAATCGAATAACGGAAGCTACGATACTGAGGTTAAAGTTCCAACGTGCGAGTCGCAGCCGCCAAGTGAGGAGAGGAAGGCAGAGGATGGTGACTCGTCCGAGTTGCGTGATGACTCGGTGGGCCACTCGGGGGAAGGGGGACGAGGGACGAGGGAGAGCAGCGAGGTGCAGAGCTCTGCTAGCCTGACGAGGAAGAGGAAGACGCGGCGGAGGAAGGAGGCTTCCGGTGGTAGTGGTGGCGGCGAGGTGGCCCTGGAGAGTGACGAGACCATGGTGAAATCCGAGCCGTTGATTGGGCTGTTGGAGATGATCAAGGCACACGAACACAGCTCATTGTTCGAGCGCCGTCTCGAGAGCCAGCACGTGGATTTGGAAACCATACAATCGAGACTCCATAAAGGACACTATTCCTCTAGCACCAACTCTTTCTTTCGTGACCTTCTCCTCCTCTTTACGAATGCCACCGTCTTCTTTACCAGAGACTCCCTGGAATCAACGGCGGCGCAGCAGCTGCGGCGCCTCGTCATGGCAGAGATGAAAAACCAAGGCCAAGCACAATCTGATCCCACCCCACAGAAGACGGATTCCAACCCTCCAAACGCTCCTCAAGCCAAACCAGAATCTCTCCTTTCCAAGCACAAAGCCTCTGCTCCAATATTGGTATGCCGAAAACGCAGTTCAATGTCATCTAAACCTTCCCCGGCGACCTTTGGCCAAAAGGGTGACCAACCCGTCACCGATAAGAAGGAAAAACCATCTTCTGATGCAAAACCACCCATGAAACCCTCTTCTTCCGAGACAGATGAAGATGAGCCTCCCAAGGCCAAGGAAAAGCCGGTCACCGGAGCTCGAAGCCTGAGAAGAAGCAACAAGAACCTCAGCAGCAACAGCAATTCTGGCAATAAGAAACTCCCCACTAACTCCACCATAAAAGCAGCGACTTTGGTGACCAAGGCTGTCGAAGCCGCAAAACCAGACAAGAGCAAAGCAGAGGGAGGACAGGACAAGAAGAAGAATGCCGCTGCTGATTTCTTGAAACGAATAAAGCGAAACGCTCCAGTGGAGGCACTGAAGAGTGGCAGTGGTAGTGGTGGAGGAAGTAGTAGCAGCAGCAGAGGTGGGACTGCAAGTATGAAAGAGCAAAAGAAAATTGTGAATAGTGGAAAGGGTGATAATAAAGGGAAAGAAAGGGCGTCAAGGCATAATAACGGTGGAGGAGGAGGGTCAGGGGATAAAAGGAACAAGAACGTTGTTGAGAATAGCAAGAGGAGTGTAGGTAGGCCTCCAAAGAAAACAGCAGAAAGCAATACAGCTTCTGCAAAGCGTGGGAGGGAAAATAGTGCTAGTGCTAGTAAGGATAAGCGACCCAAGAAACGTTCTAAGAAATGA 2196 0.5437 MENHQNNNPTRDPDLAEEEKKKRHQHPQVWGTWEELLLASAVNRHGFKDWDTVAMEVQSRTSVPNLQATALHCEQKFHDLNLRFADQLNDAVPPLLQNGAAAVDSSDHVPWLDELRKLRVAELRREVQRSDVSILSLQLKVKKLEEEREKENDGKVDEKADLAVCGEARPGNDGTGGEREVPEPTGSEPEIRRLDESTTNTDKLLPTTGDESDRENQSVNESNSTGSRFEGGKTGAGDGDGKTGVGAVPVHPGPKEPDPVGRKRRPIGEESNNGSYDTEVKVPTCESQPPSEERKAEDGDSSELRDDSVGHSGEGGRGTRESSEVQSSASLTRKRKTRRRKEASGGSGGGEVALESDETMVKSEPLIGLLEMIKAHEHSSLFERRLESQHVDLETIQSRLHKGHYSSSTNSFFRDLLLLFTNATVFFTRDSLESTAAQQLRRLVMAEMKNQGQAQSDPTPQKTDSNPPNAPQAKPESLLSKHKASAPILVCRKRSSMSSKPSPATFGQKGDQPVTDKKEKPSSDAKPPMKPSSSETDEDEPPKAKEKPVTGARSLRRSNKNLSSNSNSGNKKLPTNSTIKAATLVTKAVEAAKPDKSKAEGGQDKKKNAAADFLKRIKRNAPVEALKSGSGSGGGSSSSSRGGTASMKEQKKIVNSGKGDNKGKERASRHNNGGGGGSGDKRNKNVVENSKRSVGRPPKKTAESNTASAKRGRENSASASKDKRPKKRSKK 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02252 731 MobiDBLite consensus disorder prediction 684 698 - -
Aip08g02252 731 MobiDBLite consensus disorder prediction 495 509 - -
Aip08g02252 731 Gene3D - 370 466 IPR036427 GO:0005515
Aip08g02252 731 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 14 731 - -
Aip08g02252 731 SUPERFAMILY Bromodomain 364 451 IPR036427 GO:0005515
Aip08g02252 731 Coils Coil 134 161 - -
Aip08g02252 731 MobiDBLite consensus disorder prediction 271 285 - -
Aip08g02252 731 MobiDBLite consensus disorder prediction 145 357 - -
Aip08g02252 731 MobiDBLite consensus disorder prediction 449 579 - -
Aip08g02252 731 MobiDBLite consensus disorder prediction 183 199 - -
Aip08g02252 731 MobiDBLite consensus disorder prediction 256 270 - -
Aip08g02252 731 MobiDBLite consensus disorder prediction 699 714 - -
Aip08g02252 731 MobiDBLite consensus disorder prediction 591 731 - -
Aip08g02252 731 MobiDBLite consensus disorder prediction 653 669 - -
Aip08g02252 731 MobiDBLite consensus disorder prediction 1 27 - -
Aip08g02252 731 ProSiteProfiles Bromodomain profile. 391 434 IPR001487 GO:0005515
Aip08g02252 731 Pfam Myb-like DNA-binding domain 28 62 IPR001005 -
Aip08g02252 731 MobiDBLite consensus disorder prediction 591 622 - -
Aip08g02252 731 MobiDBLite consensus disorder prediction 288 318 - -
Aip08g02252 731 MobiDBLite consensus disorder prediction 145 164 - -
Aip08g02252 731 Pfam Bromodomain 389 437 IPR001487 GO:0005515
Aip08g02252 731 MobiDBLite consensus disorder prediction 554 579 - -
Aip08g02252 731 SMART bromo_6 359 453 IPR001487 GO:0005515
Aip08g02252 731 CDD Bromodomain 369 448 - -
Aip08g02252 731 MobiDBLite consensus disorder prediction 449 473 - -
Aip08g02252 731 CDD SANT 30 63 IPR001005 -
Aip08g02252 731 MobiDBLite consensus disorder prediction 512 553 - -
Aip08g02252 731 SUPERFAMILY Homeodomain-like 23 63 IPR009057 -
Aip08g02252 731 MobiDBLite consensus disorder prediction 630 651 - -
Aip08g02252 731 PANTHER BNAC04G22430D PROTEIN 14 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02252 Aip-Chr8 94481969 94487378 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip08g02252 Bromodomain 4.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02252 - - adu:107458545 1250.73