Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02246 ATGGTTGGTGTTCACACTCCAAAGAAAGACAATGAACCATTGATGCAGTGCACTCATCATATGTGTCCAATAAGGGTGCATTGGCATGTGAAGCAAAACTATAAGGACTATTGGCGAGTCAAGATTGCCATAACAAATTTCAATTACAGGATGAACTATTCCCTATGGACTTTTGCAATTCAGCATCCAAATCTCAACAATGTCACACAAGTTTTTAGCTTTGATTACAAGCCTATACTTCCCTATGCTTCCATAAATGACACTGGCATGTTCTTTGGCATGAAGAGAGCCATCATCAATCATGGCTTTGAGTTTGAAGGAAACTTTCTATATATCTCATGGATCACCCATGACACTCGTGTTCCATCTGTCAACATTGTTGAGAGGAATGACACCATTCATGACTTTTATGGAATCCCTAAACCTCTCTACCAGGCATGGAAAAAGGAATTGATGACATCATGGTTTCACTTGCTGCCAGAGATGGCATTGATTGCACTGAATACAAGAGGCAATTGA 519 0.3988 MVGVHTPKKDNEPLMQCTHHMCPIRVHWHVKQNYKDYWRVKIAITNFNYRMNYSLWTFAIQHPNLNNVTQVFSFDYKPILPYASINDTGMFFGMKRAIINHGFEFEGNFLYISWITHDTRVPSVNIVERNDTIHDFYGIPKPLYQAWKKELMTSWFHLLPEMALIALNTRGN 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02246 172 PANTHER COBRA-LIKE PROTEIN 1 96 - -
Aip08g02246 172 PANTHER PROTEIN COBRA 1 96 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02246 Aip-Chr8 94429877 94431267 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02246 3 86 COBRA Gene Family AT5G15630 84.524 1.71e-50 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02246 - - ahf:114925852 261.151