Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02228 ATGATGCATAGGACGGATCAATGGCGGCATGAATTTGATTCACAAACATTTAGTAGTAATGCATTGATTGCACTCTATGTGTTTGTTATTTTGCTTCTTAGAAATTACTTATTTGGTGCTTCTTGGAAGAAGGAAGAAGGATCAAACATTGTTAACACTACTGGTCGCCAAGGTTGCCTGGGTAAATACTTAACTTTCTATTTGCCAGTAGTTGAAAACTCTTGTATCAAAAGAACAAGAACAAGAGAAGAATGGAAGAAGAAGCAGCCATGGTTGAAAACTTTCTCATTCTCTGCTTTCACAGCTTCTCTTGCTATTAACTACCTTCACAGATTCCTCTTCACCTTCACCATGAAGAAGAAGCAGCCATGGTTGACTCATCTTGCTGCAGTTGCTTGCATCTCTCTTGCTGCTAAAATGGAAGAGACAGAAGTACCGCTTCCTCTTGATTTACAAGTATGA 462 0.3896 MMHRTDQWRHEFDSQTFSSNALIALYVFVILLLRNYLFGASWKKEEGSNIVNTTGRQGCLGKYLTFYLPVVENSCIKRTRTREEWKKKQPWLKTFSFSAFTASLAINYLHRFLFTFTMKKKQPWLTHLAAVACISLAAKMEETEVPLPLDLQV 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02228 153 CDD CYCLIN 93 153 IPR013763 -
Aip08g02228 153 Pfam Cyclin, N-terminal domain 94 151 IPR006671 -
Aip08g02228 153 PANTHER CYCLINS 94 153 IPR039361 -
Aip08g02228 153 SUPERFAMILY Cyclin-like 93 151 IPR036915 -
Aip08g02228 153 Gene3D - 91 153 - -
Aip08g02228 153 PANTHER CYCLIN D3.1 PROTEIN 94 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02228 Aip-Chr8 92967700 92968496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02228 74 153 Core Cell Cycle Gene Families AT4G34160 40.476 3.35e-16 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02228 K14505 - pop:18104838 89.3521