Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02224 ATGTCGTCGTCTCACTTGTTATCGTCTCACCAACAATTGGCTCGTCCGACAGAGATCTATTTCGTGTTGGAGTTCAATGAAGGCGATGAGTTATTTACCAAGGTTTCGAAAGGGAGGTTCAGTGAGGATCTCACCCGCAAGTATTTCCAGCAGCTTATCTCCGCCATAGGGTACTGCCACTCACGCGACATTTTCCACCGTGATTTGAAGCCAGAGAATCTCTTGCTTGATGAGAATGGGAATCTTAAGGTCTCCGATTTCGGACTCAGTGCCGTCAAAGACCAGGTCAGCCCTAAAATACTAAAGCCGGAGATGTTTGCCAGACCGCAGTTCACTAGCTCTCCAGTCACCAGCAAAAAATTGGGGATTCTGGAGTATTACACTCTTGCTTCTTCTTGTCTTATGTCTTACCTCTTACTTTCTCTTTTGTTTAGAGGACATGGTTTGCCTGTTCTGAATAAAAAAGGTAATCTGGCATCTCTAGATACTGATGAAGGAGGTAGCTGCGGCTTTGGAAACTGCTGCATTCTCCAAAATCCTGCACTTGTTCTTACTCCAGTTATCCCAAGGTATGCCTTTGTTGCTGTTGTACAAAGTCCTTTTGGAGAAGTGTTTTTTGATGTTTCTGATAAGAAATTGCTTGAGAAGGCAAGAAATGACGCTGAGAAGAAATATGATGAAATAAATGAGCAGAATAAAATACTTCAAAGCCATCTTGAAGCTTTGCATATTCGGAAGTCAAAGAAGGAGCGCAATGCTGCTGGAATATCATTTGGAAGTAGTAGTGCAGATACATTTGGTGATGTTGGTCTTCAAACTGTGATGACTTATCTCCGAAATTCAAAAGAAATTGTAAATACTTGTCATGTGCAGCAAATTTGTTTTGCTTGTATATTTGTATATTAA 906 0.4128 MSSSHLLSSHQQLARPTEIYFVLEFNEGDELFTKVSKGRFSEDLTRKYFQQLISAIGYCHSRDIFHRDLKPENLLLDENGNLKVSDFGLSAVKDQVSPKILKPEMFARPQFTSSPVTSKKLGILEYYTLASSCLMSYLLLSLLFRGHGLPVLNKKGNLASLDTDEGGSCGFGNCCILQNPALVLTPVIPRYAFVAVVQSPFGEVFFDVSDKKLLEKARNDAEKKYDEINEQNKILQSHLEALHIRKSKKERNAAGISFGSSSADTFGDVGLQTVMTYLRNSKEIVNTCHVQQICFACIFVY 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02224 301 Gene3D Transferase(Phosphotransferase) domain 1 1 134 - -
Aip08g02224 301 PANTHER - 4 120 - -
Aip08g02224 301 SMART serkin_6 2 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g02224 301 ProSitePatterns Serine/Threonine protein kinases active-site signature. 64 76 IPR008271 GO:0004672|GO:0006468
Aip08g02224 301 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 4 120 - -
Aip08g02224 301 SUPERFAMILY Protein kinase-like (PK-like) 5 96 IPR011009 -
Aip08g02224 301 ProSiteProfiles Protein kinase domain profile. 1 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g02224 301 Pfam Protein kinase domain 6 95 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g02224 301 Coils Coil 211 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02224 Aip-Chr8 92683468 92687749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02224 1 120 CBL-interacting serine-threonine protein kinases AT2G30360 55.372 2.83e-41 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aip08g02224 Pkinase 1.1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02224 - - ahf:112770193 250.366