Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02223 ATGGCAAAACCTATACCCAAAATTGGTTTGCATAAAAATAGACGTATTGGTTCACGTAAACATGCTCGTAAAATACCAAAGGGCATTATTCATGTTCAAGCTAGTTTCAACAATACCATTGTCACTGTTACCGATGTACAGGGTCAGGTAATTTCGTGGTCCTCCGCAGGTACTTGTGGATTCAAAGGTACGCGAAGGGGAACACCATTTGCCACCCAAACCGTAGCAAGAAATGTTATTCGAACAGTAGCGAATCAAGGCATGCAACGAGCAGAAGTTATGATAAAGGGTCCCGGTGTCGGAAGAGATGCGGCATTAAGAGCTATTCGTAGAAGTGGCATACTCTTAAATTTTATACGGGATGTAACCCTTATGCCATATAATGGGTGTAGGTCCCCTAAAAAATGA 408 0.4216 MAKPIPKIGLHKNRRIGSRKHARKIPKGIIHVQASFNNTIVTVTDVQGQVISWSSAGTCGFKGTRRGTPFATQTVARNVIRTVANQGMQRAEVMIKGPGVGRDAALRAIRRSGILLNFIRDVTLMPYNGCRSPKK 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02223 135 PANTHER 30S RIBOSOMAL PROTEIN S11, CHLOROPLASTIC 1 135 - -
Aip08g02223 135 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 1 135 IPR001971 GO:0003735|GO:0005840|GO:0006412
Aip08g02223 135 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 9 135 IPR001971 GO:0003735|GO:0005840|GO:0006412
Aip08g02223 135 MobiDBLite consensus disorder prediction 1 22 - -
Aip08g02223 135 Hamap 30S ribosomal protein S11 [rpsK]. 12 135 IPR001971 GO:0003735|GO:0005840|GO:0006412
Aip08g02223 135 SUPERFAMILY Translational machinery components 23 135 - -
Aip08g02223 135 MobiDBLite consensus disorder prediction 8 22 - -
Aip08g02223 135 Pfam Ribosomal protein S11 28 135 IPR001971 GO:0003735|GO:0005840|GO:0006412
Aip08g02223 135 Gene3D Ribosomal protein S11 10 135 IPR036967 GO:0003735|GO:0005840|GO:0006412
Aip08g02223 135 TIGRFAM uS11_bact: ribosomal protein uS11 19 135 IPR019981 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02223 Aip-Chr8 92618738 92619145 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02223 28 128 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 33.636 6.02e-12 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02223 K02948 - fve:10251554 237.269