Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02222 ATGCTGCTGTCGTCATCGCTGTGGAGAGAGGAATTGTTCTGTGAAGAGAGGGCTGCCCAGGTTGTTGCTGCTGGTTCTGATTCTGTTAGATTGATTCTGAGTTTGAGTATCACCACGATCTGGAAACCTAAAGACATCGATCACTTCAAGAAGGAAGAGGGTGTGACATACATTTTGAATTTGCAGCAAGATAAGGATGTAGAATATTGGGGAATAGACTTGAAGTCGATAACAAGGAGGTGTCATGAACTCGATGTTCGACATATGAGGAGGCCGATCAAGAGTGGTTCCTCCACTGAGTTTCTCAATCATTTCCAAAATGGCCCTGTTTGGGTTCATGGGGATGTTCATCACAGATGCTGGGCTATGCTGGAATTAGTTACAGTAATCCCACACTTTCCTCAGCTATAA 411 0.4428 MLLSSSLWREELFCEERAAQVVAAGSDSVRLILSLSITTIWKPKDIDHFKKEEGVTYILNLQQDKDVEYWGIDLKSITRRCHELDVRHMRRPIKSGSSTEFLNHFQNGPVWVHGDVHHRCWAMLELVTVIPHFPQL 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02222 136 Gene3D Protein tyrosine phosphatase superfamily 31 118 IPR029021 -
Aip08g02222 136 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 41 95 - -
Aip08g02222 136 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC 41 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02222 Aip-Chr8 92305657 92306825 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02222 42 94 Protein tyrosine phosphatase (PTP) family AT3G10940 75.472 1.63e-24 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02222 - - adu:107488438 106.686