Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02155 ATGGAACCTAGAAATGAATTCCACCATGGATCACACTCAGTAACACATGACCGTATGGATGGCAGTAATACTAACAGAAGACCACCTGACCTCAATAAATCAGAAGTTAAACCTGTACTTAATTACTCCATTCAGACGGGTGAGGAATTTGCACTTGAATTTATGAGAGATAGGGTGAATCTTGGGAAACCTGTATTTTCAAATGTTGGTGATTCCAATTATACAACGGGATATATGGAGCTGCAAGGCATGTTAGGCATTGGTCATGCTGGATCTGGAAGTGGATCAGACATCTCTATGCTCTCAGTGGTTGACAAATATCCAAAAGAGTTTGATAAAATAAACACATCAATATATGGGGACAGAAGTAATTATGGGTCCATTCGATCAATACCAACTACTTCATTGAATCAAGACAATAGACAATTTGTGCATAGATATGGCTCTTCTCGAGGTTATGATAGCTCATTGTTGATGATGAAGTTTCTTTGCAGCTTTGGTGGTAGAATATTACCACGACCTAGTGATGGAAAGCTAAGGTATGTTGGAGGTGATACACGTATTCTTCGCATAAGAAAGGACATTACTTGGCAGGAGCTTATGCATAAAGCATTGTTAATCTATAGTCAGGTTCAAGTAATCAAGTATCAGCTTCCTGGGGAAGATCTTGATGCTCTGGTATCGGTATCATCTGACGAGGATTTGCAGAATATGATGGAGGAATGCACTCATCTACAAGATAGAGAAGGAACGCAGAAGCTTAGGATGTTTTTGTTCTCAATCAGTGATTTGGAGGATGCTCAGTTTGGTCTTGGTAGCATGGGGGATGATTCTGAGGTCCAGTATGTTGTTGCTGTTAATGGAATGGACTTGGGATCAAGGAGAAACTCAACCCTGATTGGTGTCGGCTTTTCAGCAGATGTTGTGCATGAATTGGATGGACAAACTATTGAGAGGGAGACCAATAGAGTTGCTGTAGAATCTGAAGGTGTTAGCAATGTTCCCTTGACTAACAAATTTGACTTGCCTTTGAATAGTCAGTCTTCGCAACCAGTGCTATCCACAGCCCCAAATTCCTATGAAACCTATCCTCTGTTTCACAGTGACCAAATGATGCACCATGAGGAGGTGAGAGGTCAATATGGCCTTAATCCTGCTTATATGCCTGTTGTTGGAGAGACTCCTATTACAATGCCCACTACCCAGGTGGTTATTAATCCACAAGGGGTTTTGAATGACATCTATCCACCTAGTGGATTACAAGTCCAAAGTCCAGAAATACCTACAACTCTGATGGCAAATACTTCAATTCAACAAGGAAGCGACCCTGGGAAAGCTTTCTCATTAGAAACACCACTTCCAGCTCCTGTGCAACTGTTTGATGGTTACCCAAAAAATAATCTTCCTGAAGCATCAGTTGCAGTTAATGTGCCAGACGGGTATTCATTGCCTCCAACTAAAAAGGACCAGCTTCAGGATGATGAAGTGGCTTCGTCTACTTCTAGGAGCACCTTTGGTCCAACTTACGTTGATTCTCACTCCAATGCAGTTGACTTGAGTTGTCTTCACCCTCCTCCTCTTCCCAAAAGAGTTTACTATTCAGAAAGAATTCCAAGGGAGCAAATAGAGTTGCTGAATCGGTCTTCAAAGTCAGATGATGCACATGGTTCTCAGTTTAATGTGTCAGAATTACTTTCTGAAGTTAACCCGACAGAATTACTGACAGAATCTGGTGAAAACTTGCATGATGGAAATCTGTCTAATCTAACTGAGTATTCGAAGGTCGTAGCAAAGCCCTTGCAATCAGACGGCATTACAATTGATAATGGGGCTGTTAAACATCAAAAGCAATTGCCTGATGCAAGCGGTCAGCTGAAGTCAAAGTTGAGTGAGCATGTAAAGCCCGAGTTGAAGCAGGTGTTGGCAAATAGTGAAGGAATCATAGATGCAGTAAATAAGGATAACGTTCCTCAGTTGGAAAGTGAAATTAATAGTAAGGATAACCATAACAAAGCCCTGCTTGGTGAGAAGAAGGGTAGTAAGTCAGACTTAACTACTTTGCAACAGGTTCCTTCTGTTAAGCAGCTTGAGGATCCAGCATCAAATCTTCCAGATATCGATTGGGGTGGTGTTTCTGTGAAGGACTCTAAGGATGATTCTGTTGTGCAAGGATTGCCTGTTTCTGTAAATGGGAATGCTACGACCAATGGTGATTCACAGCATTATCCTTCAAATGTTTCCAAAGAAGGACAAGGTGACATTCTTATTGATATTGATGATCGATTTCCCCGTGAATTGCTTACAGATATGTATTCTAAAGCTTTACTGGAAGAAAGTTCCTCTGGTCGGCATCCTTTAACCTCAGATGGAGTGGGTCTAAGCATAAATATGGAAAATCATGAACCTAAACATTGGTCATATTTTCATAAACTGGCACAAGAAGGGTTAGATAATGTGTCCCTTATTGACCAGGATCATGATTTTTCAGGTGAGATGGGAAAGGTGGAAGAAGATAATAGAACTCAACATGTTACGCCTCTAACAGCTGAAGAAAAATATCAGAATGACTTAGATGGAAGAATTGGAACAGAAACGGCTGTTCCTGAGTCAAACTATGATCATTCCCAATTGAATGACGCTGAAAGTATGCAGTTTGATGCTATGATGGAAAATGCAAGGGCACAAGAGTCAGAATTTGAGGTAATAATGAATGAAGATCTTGAAGAGCTTAAGGAACTGGGTTCTGGTACCTTCGGGACTGTGTATCATGGAAAATGGCGAGGAACTGATGTCGCAATTAAAAGAATAAAGAAAAGCTGTTTCACTGGTCGTTCATCTGAGCAAGAGAGACTGACTGTAGAATTCTGGCGGGAAGCTGACATTCTTTCCAAGCTTCATCATCCAAATGTGGTAGCATTTTATGGTGTAGTCCAGGATGGACCAGGTGGAACGATGGCCACTGTTACAGAGTTCATGGTGGATGGTTCCCTTAGGCATGTATTACTTCGTAAGGATAGGTATCTTGATCGTCGCAAGAGACTGATTATTGCAATGGATGCAGCTTTTGGAATGGAATATTTGCACTCAAAGAATATTGTGCATTTTGACTTAAAATGTGATAATTTGCTTGTTAACTTAAAAGATCCTTTAAGGCCAATATGCAAGGTTGGTGATTTTGGCTTGTCAAAAATCAAACGGAACACATTGGTGTCTGGTGGTGTACGGGGGACTCTACCCTGGATGGCACCGGAGCTCCTGAACGGTAGCAGCAACAAGGTCTCAGAAAAGGTTGACGTGTTTTCATTTGGCATTGTATTATGGGAGATTCTAACGGGCGAGGAGCCATATGCAAATATGCACTATGGTGCAATTATAGGTGGAATTGTGAATAACACATTGAGGCCAACAATTCCAAGTTATTGTGATAATGAATGGAGAACACTGATGGAGCAATGTTGGGCGCCTAACCCTGCAGCTCGGCCTTCCTTCACTGAAATTGCGAGTCGGCTGCGTGTAATGTCGGCAGCAGCTAGCCAAACCAAAACACAGGGCCACAAGGCTTCTAAGTGA 3570 0.4165 MEPRNEFHHGSHSVTHDRMDGSNTNRRPPDLNKSEVKPVLNYSIQTGEEFALEFMRDRVNLGKPVFSNVGDSNYTTGYMELQGMLGIGHAGSGSGSDISMLSVVDKYPKEFDKINTSIYGDRSNYGSIRSIPTTSLNQDNRQFVHRYGSSRGYDSSLLMMKFLCSFGGRILPRPSDGKLRYVGGDTRILRIRKDITWQELMHKALLIYSQVQVIKYQLPGEDLDALVSVSSDEDLQNMMEECTHLQDREGTQKLRMFLFSISDLEDAQFGLGSMGDDSEVQYVVAVNGMDLGSRRNSTLIGVGFSADVVHELDGQTIERETNRVAVESEGVSNVPLTNKFDLPLNSQSSQPVLSTAPNSYETYPLFHSDQMMHHEEVRGQYGLNPAYMPVVGETPITMPTTQVVINPQGVLNDIYPPSGLQVQSPEIPTTLMANTSIQQGSDPGKAFSLETPLPAPVQLFDGYPKNNLPEASVAVNVPDGYSLPPTKKDQLQDDEVASSTSRSTFGPTYVDSHSNAVDLSCLHPPPLPKRVYYSERIPREQIELLNRSSKSDDAHGSQFNVSELLSEVNPTELLTESGENLHDGNLSNLTEYSKVVAKPLQSDGITIDNGAVKHQKQLPDASGQLKSKLSEHVKPELKQVLANSEGIIDAVNKDNVPQLESEINSKDNHNKALLGEKKGSKSDLTTLQQVPSVKQLEDPASNLPDIDWGGVSVKDSKDDSVVQGLPVSVNGNATTNGDSQHYPSNVSKEGQGDILIDIDDRFPRELLTDMYSKALLEESSSGRHPLTSDGVGLSINMENHEPKHWSYFHKLAQEGLDNVSLIDQDHDFSGEMGKVEEDNRTQHVTPLTAEEKYQNDLDGRIGTETAVPESNYDHSQLNDAESMQFDAMMENARAQESEFEVIMNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDNEWRTLMEQCWAPNPAARPSFTEIASRLRVMSAAASQTKTQGHKASK 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02155 1189 Pfam PB1 domain 176 259 IPR000270 GO:0005515
Aip08g02155 1189 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1032 1044 IPR008271 GO:0004672|GO:0006468
Aip08g02155 1189 SUPERFAMILY Protein kinase-like (PK-like) 891 1169 IPR011009 -
Aip08g02155 1189 Gene3D Phosphorylase Kinase; domain 1 900 994 - -
Aip08g02155 1189 MobiDBLite consensus disorder prediction 476 509 - -
Aip08g02155 1189 MobiDBLite consensus disorder prediction 729 748 - -
Aip08g02155 1189 PANTHER SERINE-THREONINE PROTEIN KINASE 900 1189 - -
Aip08g02155 1189 PANTHER SERINE-THREONINE PROTEIN KINASE 80 900 - -
Aip08g02155 1189 SMART PB1_new 174 261 IPR000270 GO:0005515
Aip08g02155 1189 MobiDBLite consensus disorder prediction 664 678 - -
Aip08g02155 1189 Gene3D Transferase(Phosphotransferase) domain 1 995 1189 - -
Aip08g02155 1189 SUPERFAMILY CAD & PB1 domains 175 263 - -
Aip08g02155 1189 MobiDBLite consensus disorder prediction 1 24 - -
Aip08g02155 1189 CDD STKc_MAP3K-like 913 1170 - -
Aip08g02155 1189 MobiDBLite consensus disorder prediction 729 747 - -
Aip08g02155 1189 ProSiteProfiles Protein kinase domain profile. 907 1172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g02155 1189 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 900 1189 - -
Aip08g02155 1189 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 80 900 - -
Aip08g02155 1189 Pfam Protein tyrosine and serine/threonine kinase 908 1170 IPR001245 GO:0004672|GO:0006468
Aip08g02155 1189 Gene3D - 178 261 - -
Aip08g02155 1189 ProSitePatterns Protein kinases ATP-binding region signature. 913 938 IPR017441 GO:0005524
Aip08g02155 1189 SMART serkin_6 907 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g02155 1189 MobiDBLite consensus disorder prediction 1 36 - -
Aip08g02155 1189 MobiDBLite consensus disorder prediction 662 685 - -
Aip08g02155 1189 CDD PB1_UP2 163 259 - -
Aip08g02155 1189 PRINTS Tyrosine kinase catalytic domain signature 1141 1163 IPR001245 GO:0004672|GO:0006468
Aip08g02155 1189 PRINTS Tyrosine kinase catalytic domain signature 989 1002 IPR001245 GO:0004672|GO:0006468
Aip08g02155 1189 PRINTS Tyrosine kinase catalytic domain signature 1097 1119 IPR001245 GO:0004672|GO:0006468
Aip08g02155 1189 PRINTS Tyrosine kinase catalytic domain signature 1026 1044 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02155 Aip-Chr8 86698820 86704762 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02155 15 613 MAP Kinase Kinase Kinase AT1G16270 38.102 1.14e-95 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Aip08g02155 PK_Tyr_Ser-Thr 1.2e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02155 - - gmx:100799639 1716.05