Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02153 ATGGAACATTCAAGATTCCAAAAAGTTCTTCCAAGCAATACAATGGAACCAAGAAATGGTGAATTCCAGCCTGGGTTGCAGCCAATGATGCAGGATCGACCGGATGACATGCATACAATTAGAAGACCACCTAATGTTGGTACGGCACAAGCCAAACCTGTACTTAATTTTTCCATACAGACAGGTGAGGAATTTGCTCTCGAATTTATGAGAGATAGGGTGAATCTTGGGAAGCCTATGTTTCCAAATGTCGGTGACACTAATTATACACCAGGTTATATGGATCTAAAAGGCATTTTAGGCATTAGTCATCCAACATCAGAAAGTGGATCAGACATTTCCATGCTTTCAATGGTTGACAAATATCCAAAAGAGTTTGAAAGAGTGAACACATCATTGCAGGGAGACAAAAGCAATTATGGGTCAATTCGATCAATACCAAGAACTTCAATGACTCAGGACAGTAGACAACTTGTGCAGAAGTATGGCTCTTCTCGAGGTTCCGATAGCTCATCAATGCTATTGAAGTTCCTTTGCAGCTTTGGTGGGAGAATATTACCTAGACCAAGTGATGGAAAACTAAGGTATGTTGGAGGTGATACACGTATTCTTCGTATAAGAAAGAATATATCTTGGCAGGAGCTCTTGCAGAAAGCATTATTAATGTATAGTCAGGTTCATGCAATCAAGTATCAGCTTCCGGGGGAAGATCTTGATGCTTTGGTATCTGTGTCATGTGATGAGGATTTGCAGAATATGATGGAAGAATGTAACCATCTAGAAGACAGAGAAGGATCACAAAAGCCTAGGATGTTTTTGTTCTCATTGAGTGATTTGGAGGACGCTCAATTTGGTCTCAGTGGTTTGGGTGATGATTCTGAGATCCAATATGTTGTTGCTGTTAACGGCATGGACATGGGATCAAGAAGAAACTCAACCCTGATTGGCGTGAACTTTTCAGCAAATGATCTGCATGATTTGGACAGGCAGAACACTGAAAGGGAGACTGGTAAAGTTGCTGTTGAATCTGTAGGTGTCAACAATTCTCTCCTGAATAACAAATTTGACTCATCACCAAATGTGGAATCCTTGCAACCAGTGCTACCTACTTCCTCAAATTCTTATGAAAGATATCCACAGTCCTTGCAACCAATGCACCATGGGGATCCTGTTGGTCAATATCATGTTTCTAGATCTGTTGTTGAAGACATTCCTACTACTATGCCTCCTCGTGCACTGATTAATCAAGATGGGGTTTTTAGCAAAGGCCATCCACCAGTCGGATTACCAGTACATAATTCTGAAATACCACCAGTGGTCACAAAAAAGAAGGTTGATAGTTTGATTGAACAAGCAAGCGACCAGGGTAAAGTTTTATACTTGGAAACCCCATCCTCAGCTCCTACTCAACTATTTGATGGTTACATGAAAAATAATTTTCCCGAAGCAACAGCTGTAGTTACTATGCCAGAGGGCTATCCAATACCTCCGACAAAAAAGGACCAGCTACAGAACTATGAAGATGGTGCTTCTACATCTAACAGTGGCTTTGCTCCCACTTATGTCGACTCCCAGTCAAATGCTGTTGATTTTAGTTCTCTTAACCCTCCTCCTCTTCCTGAAAGAGTTTACTATTCAGAAAGGATTCCTAGGGAGCAAGTAGATTTGCTGAATCGGTCCACCAAGTCAGATGATTTACATGGTTCTCAGTTTAACATTTCCGATTTACTTTCTGATGCAAAACCCTCAGATTCAGTTACAGGATCTGACGACAACTTGCATAATGGGAATCAGCCTCTCCGAGCTGAGGAATCGGGTGTTGCAGCAAAGCCTTTGCCTGCTGATGGCTATGCTACCAAACATCAAATATACAAACATTTTCCTGATCCAAGTAGCCAGTTGAAGTCAAAACTAACTGAGCATGTGAATTCTGAGTTGAAGAAGGTTCCCTCTGCTAGGCATCTTGAGGATCCTGCTTCATGTCTTCCCGAGGTTGATTGGGGCAATGCCACTGTTACAGAATCTAATGAAAGTCGCATGGTTCAAGGACTACCTGTTTCTCTAAATGGGAACCAAACTACCAAAGATGATTTTCAACCTTCTTCAAGTGTTGCTTCAAAGACATCACAAGGTGACATTCTAATTGATATTGATGATCGATTTCCCCGTGAAGTGCTTAGTGACATGTATAAAGCTTTACTTGAAGAAGGTTTCTCGGGTCGGCATCCACTAACCTCGGATGGAGTAGGTCTAAGCATAAATGTGAAAAATCATGAACCTACACCTTGGGAATATTTTCACAAACTGGCACAAGAAGGACTCAATAATGTCTCTCTCATTGATCAGGATCATGTTAGTTTTTCACCTGCAATAGAAGAAGTGGAAGATGACGGTAGAACTCAACATGTTACGCCTCTAACAACAGGTGAAATATATCAGAAAGACTTACATGGAAGGGTTGGAACAGAAACTACTATTCTAAAGCCAAATGATCCCCTCGTGAAGGATACTGAAAGTATGCAATTTAATGCTATCATGGAAAACATAAGAGCACAGGAATCAGTTTTTGAGGATGGGAAGTTTGAAACAAGAAATCGTACACCTCCTGTTGATCCTCCCGTAAGTGAAATTGACCCGAATTCTTTGCAGGTCATAATGAATGAAGATCTTGAAGAGCTGAAGGAGCTGGGTTCTGGTACCTTTGGGACTGTGTATCATGGAAAATGGCGTGGAACAGATGTTGCCATCAAAAGAATAAAGAAAAGCTGTTTCACCGGTCGATCATCAGAGCAAGAGAGACTGACTTTAGAATTCTGGCGGGAAGCTGATATTCTTTCCAAGCTTCATCACCCAAATGTTGTGGCATTTTATGGTGTAGTTCAGGATGGACCTGGAGGAACAATGGCCACTGTTACGGAGTACATGGTGGATGGTTCTCTTCGGCATGTATTGCTTCGCAAAGATAGGTATCTAGATCGTCGCAAGAGGCTGATAATTGCTATGGATGCAGCTTTTGGAATGGAGTATTTACACTCAAAAAATATTGTTCATTTTGACTTAAAATGTGATAATTTGCTTGTGAACTTGAAAGATCCTTTACGGCCAATATGCAAGGTTGGTGATTTTGGCTTGTCAAAAATTAAGCGGAATACCTTGGTCTCAGGTGGCGTGCGGGGGACACTTCCTTGGATGGCACCGGAGCTGCTGAATGGTAGCAGCAACAAGGTGTCAGAAAAGGTTGATGTGTTCTCCTTTGGCATAGTATTGTGGGAAATTCTAACTGGTGAGGAGCCTTATGCCAATATGCACTATGGTGCAATCATAGGTGGGATTGTTAATAACACATTAAGGCCAACAATTCCCAGTTACTGCGACTCAGAATGGCGAACACTGATGGAGCAGTGCTGGGCACCAAATCCTGCAGTCAGACCTTCCTTTACAGAAATTGCCCGTCGATTGCGTGTCATGTCTGTGGCAGCTAGCCAGGCAAAGGTGCAGGGCCAAAAGGCGTCTAAATGA 3519 0.4203 MEHSRFQKVLPSNTMEPRNGEFQPGLQPMMQDRPDDMHTIRRPPNVGTAQAKPVLNFSIQTGEEFALEFMRDRVNLGKPMFPNVGDTNYTPGYMDLKGILGISHPTSESGSDISMLSMVDKYPKEFERVNTSLQGDKSNYGSIRSIPRTSMTQDSRQLVQKYGSSRGSDSSSMLLKFLCSFGGRILPRPSDGKLRYVGGDTRILRIRKNISWQELLQKALLMYSQVHAIKYQLPGEDLDALVSVSCDEDLQNMMEECNHLEDREGSQKPRMFLFSLSDLEDAQFGLSGLGDDSEIQYVVAVNGMDMGSRRNSTLIGVNFSANDLHDLDRQNTERETGKVAVESVGVNNSLLNNKFDSSPNVESLQPVLPTSSNSYERYPQSLQPMHHGDPVGQYHVSRSVVEDIPTTMPPRALINQDGVFSKGHPPVGLPVHNSEIPPVVTKKKVDSLIEQASDQGKVLYLETPSSAPTQLFDGYMKNNFPEATAVVTMPEGYPIPPTKKDQLQNYEDGASTSNSGFAPTYVDSQSNAVDFSSLNPPPLPERVYYSERIPREQVDLLNRSTKSDDLHGSQFNISDLLSDAKPSDSVTGSDDNLHNGNQPLRAEESGVAAKPLPADGYATKHQIYKHFPDPSSQLKSKLTEHVNSELKKVPSARHLEDPASCLPEVDWGNATVTESNESRMVQGLPVSLNGNQTTKDDFQPSSSVASKTSQGDILIDIDDRFPREVLSDMYKALLEEGFSGRHPLTSDGVGLSINVKNHEPTPWEYFHKLAQEGLNNVSLIDQDHVSFSPAIEEVEDDGRTQHVTPLTTGEIYQKDLHGRVGTETTILKPNDPLVKDTESMQFNAIMENIRAQESVFEDGKFETRNRTPPVDPPVSEIDPNSLQVIMNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTLEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDSEWRTLMEQCWAPNPAVRPSFTEIARRLRVMSVAASQAKVQGQKASK 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02153 1172 MobiDBLite consensus disorder prediction 499 521 - -
Aip08g02153 1172 Gene3D Phosphorylase Kinase; domain 1 883 977 - -
Aip08g02153 1172 Gene3D Transferase(Phosphotransferase) domain 1 978 1172 - -
Aip08g02153 1172 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1015 1027 IPR008271 GO:0004672|GO:0006468
Aip08g02153 1172 SUPERFAMILY CAD & PB1 domains 190 277 - -
Aip08g02153 1172 SMART serkin_6 890 1156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g02153 1172 PANTHER SERINE-THREONINE PROTEIN KINASE 86 1172 - -
Aip08g02153 1172 SMART PB1_new 189 276 IPR000270 GO:0005515
Aip08g02153 1172 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 86 1172 - -
Aip08g02153 1172 MobiDBLite consensus disorder prediction 577 613 - -
Aip08g02153 1172 MobiDBLite consensus disorder prediction 504 521 - -
Aip08g02153 1172 ProSitePatterns Protein kinases ATP-binding region signature. 896 921 IPR017441 GO:0005524
Aip08g02153 1172 Gene3D - 193 275 - -
Aip08g02153 1172 SUPERFAMILY Protein kinase-like (PK-like) 874 1152 IPR011009 -
Aip08g02153 1172 Pfam Protein tyrosine and serine/threonine kinase 891 1153 IPR001245 GO:0004672|GO:0006468
Aip08g02153 1172 CDD PB1_UP2 178 274 - -
Aip08g02153 1172 PRINTS Tyrosine kinase catalytic domain signature 972 985 IPR001245 GO:0004672|GO:0006468
Aip08g02153 1172 PRINTS Tyrosine kinase catalytic domain signature 1009 1027 IPR001245 GO:0004672|GO:0006468
Aip08g02153 1172 PRINTS Tyrosine kinase catalytic domain signature 1080 1102 IPR001245 GO:0004672|GO:0006468
Aip08g02153 1172 PRINTS Tyrosine kinase catalytic domain signature 1124 1146 IPR001245 GO:0004672|GO:0006468
Aip08g02153 1172 ProSiteProfiles Protein kinase domain profile. 890 1155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g02153 1172 MobiDBLite consensus disorder prediction 577 599 - -
Aip08g02153 1172 CDD STKc_MAP3K-like 896 1153 - -
Aip08g02153 1172 MobiDBLite consensus disorder prediction 1 24 - -
Aip08g02153 1172 Pfam PB1 domain 191 274 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02153 Aip-Chr8 86567260 86574692 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02153 49 1172 MAP Kinase Kinase Kinase AT1G16270 48.595 0.0 964
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Aip08g02153 PK_Tyr_Ser-Thr 1.6e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02153 - - aip:107612789 2262.65