Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02106 ATGAGAATTCAGAAACACAATTTCCTTTTACCCCAAAATCCCCATTTCAGCACCAACCCGCGTCATTCTCCACTGCCGTCGCCGCTCCGTCACGGTTGCTTCGCCGGCGCTCCTCAACACACACTCTCTCTCAACCATAAACCCTACTCCGACGCCTTACTCAAACCAAGGGTTTTCAGCGAGGTAGAACTCCAGCGAGGGATGACAGGCAGGAGCACCTCATCTCAGCTCCTGGAAACTCTTCCACTTTCAAATATAAAATGGATTTGCCCAACTGCTCCTACCCGTCCTGTGGCCATACTTGGTGGCTTTTCTTGCACTGCATGTAATCACAAATCCTTATCTACTGCACACTACATAAAGTCGCGACACTGTAACACTGCAAAAGCTTTTCTTGCCTTAGACTCTTCATACAGATGGGCGCTTAGTAGCACTCTCCTGCAGAACCGTGTTGGAGAGCTGTATTCTCTGGTTCAGTTTCTACAAATAGTTCCTTATTCCTATTATTTCTGCAAGGACTGTGATTGTCGGGCTCTTGATCACAGAATTGATGAATTTCTCAGAGGAGGTTTAGTTAGGTGTCCATGTTCCAGATGTCAATGTGGGACGTTTAAACAGTTGATCGACATTAAGATTGATCTATATACTCATGGGTTTAAACCTAATTATTGGGTTTGGACAGAGCATGGAGAAGAGATACCCACAGAGAATCAGATTAGGATAGAAGAAGATATTGAAAGTAGCTCTGAATTAGTCGATACATTTAGAAGTAAATACGAGCAGATCCATGGGAGCAATAATTCTTTATCCAACTTTCCATCATGGTTCCATGAGCATGTAAAAAATCCCAGTAATGGCATAACTTGTCCTCATTTATTGAGTTTAGCATTCAGGCCAAAAACTAGGGCCACGAGTGTTGGTATGTTCAAGGTTAACGGGTATAGATTTCATACTCCTGAGCATGCATCTGGAAAGAAGACAGATAATACAGGCATATATGTTAAAGGTGATGGAGGGAATGATGCATCTGATTGGTACGGCACTCTTAAAGAGATTTTGATTATTGAATATCCAAGTCTTGTTAGTTTAAGAGTCACCTTGTTTTACTGTGAGTGGTATGACCCTACCAGGCCTCGAGGAACGCGTAGACACAAAGACTACAAAATAATTGAAGATATGGTTGGTAGAGACGGAGATCGCGGTCGTGGCCGTGGCCGTGGCCGTGGCCGTGGCCGTGGCCGTGGCCGTGGCCGAGGCCGAAGGGGGAGGCCTAGGCTTTCTACTGGTCACCCTCTTGACTTGCATGCGGATCCATACTCTCTCGTTGGGTCATCATCCGACACGACTGCTCCAACCAATGGGAGACAACCACCTATTGCTACTACTACCCCCTCCCGTCAGGAGCCTCAGATACACATGATGCCTACTCCGGGTGTGCCAAGATCATGGACTCAACAAGCCAATGAACCTTCCAACACTGCCTCACATGGTGTGCAGAGTGATCCAGCTATTGTAGCTCCTAATCTAGCAGGATCTTGTGGGGAAAGACAAACCACATCTAATAGTACCCAAGATGCTCAGGGTCAAGGAACATCCACTGCCACTGGTCACTCCAGCACGAGTGCTCCCAAGCTTAGATATGATGGTGCCAAATGTTGGCACCCACCTAAGCCTGGATTGAAGCATATCTCTCAGGTTTTTAAGGAAAACTACAACAAGCCTTGTCTGAGTTTTGATGAGGCAGATGATGATACTCGAAAAATATGGTGGACTGAGTGGAGGAAATGCTTTGACATTATTGATACGGAAGAGGATGATATCTATCAAGCTTGGAGGTTTAGGGCTGCCAAGCGCTTGCGAGGTATGCTCCATGCCATTCGCAAAAAAGGTGCCCGTCCATATTGGATCCCACCAGAAGTTATCGGTGAATTGATGAGACGTTGGGACACTGATGCCTATAGACAATTACAGGCGAGAAATACAGCTGCCAGGAAATCGACTCGAGGTACTTCCCTTCACACTGCAGGAGGCACCACCTTTCCAGAAGCGAGGTTACGCTTGGTAAGTTGTTTATAG 2076 0.4634 MRIQKHNFLLPQNPHFSTNPRHSPLPSPLRHGCFAGAPQHTLSLNHKPYSDALLKPRVFSEVELQRGMTGRSTSSQLLETLPLSNIKWICPTAPTRPVAILGGFSCTACNHKSLSTAHYIKSRHCNTAKAFLALDSSYRWALSSTLLQNRVGELYSLVQFLQIVPYSYYFCKDCDCRALDHRIDEFLRGGLVRCPCSRCQCGTFKQLIDIKIDLYTHGFKPNYWVWTEHGEEIPTENQIRIEEDIESSSELVDTFRSKYEQIHGSNNSLSNFPSWFHEHVKNPSNGITCPHLLSLAFRPKTRATSVGMFKVNGYRFHTPEHASGKKTDNTGIYVKGDGGNDASDWYGTLKEILIIEYPSLVSLRVTLFYCEWYDPTRPRGTRRHKDYKIIEDMVGRDGDRGRGRGRGRGRGRGRGRGRGRRGRPRLSTGHPLDLHADPYSLVGSSSDTTAPTNGRQPPIATTTPSRQEPQIHMMPTPGVPRSWTQQANEPSNTASHGVQSDPAIVAPNLAGSCGERQTTSNSTQDAQGQGTSTATGHSSTSAPKLRYDGAKCWHPPKPGLKHISQVFKENYNKPCLSFDEADDDTRKIWWTEWRKCFDIIDTEEDDIYQAWRFRAAKRLRGMLHAIRKKGARPYWIPPEVIGELMRRWDTDAYRQLQARNTAARKSTRGTSLHTAGGTTFPEARLRLVSCL 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02106 691 Gene3D - 114 187 IPR038718 -
Aip08g02106 691 MobiDBLite consensus disorder prediction 441 470 - -
Aip08g02106 691 MobiDBLite consensus disorder prediction 479 499 - -
Aip08g02106 691 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 73 108 - -
Aip08g02106 691 MobiDBLite consensus disorder prediction 395 542 - -
Aip08g02106 691 Pfam Transposase-associated domain 187 231 IPR029480 -
Aip08g02106 691 MobiDBLite consensus disorder prediction 405 425 - -
Aip08g02106 691 Pfam SNF2-related domain 117 168 IPR000330 GO:0005524|GO:0140658
Aip08g02106 691 MobiDBLite consensus disorder prediction 512 542 - -
Aip08g02106 691 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 73 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02106 Aip-Chr8 80975802 80985251 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g02106 110 181 RAD5 or RAD16-like Gene Family AT1G05120 70.833 2.17e-26 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Aip08g02106 Transpos_assoc 1.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02106 K15083 - aip:107613395 555.829